RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 MGAT5Q09328 741 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 CBLBQ13191 982 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
HMGN1-213ENST00000482192 NKAIN1Q4KMZ8 207 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ICE2Q659A1 982 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 PAQR3Q6TCH7 311 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 TTLL10Q6ZVT0 673 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 RNF44Q7L0R7 432 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 PRICKLE2Q7Z3G6 844 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 PALM2Q8IXS6 379 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ZBED8Q8IZ13 594 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 TTC29Q8NA56 475 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-213ENST00000482192 PPFIBP2Q8ND30 876 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 MCOLN3Q8TDD5 553 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ADAMTS17Q8TE56 1095 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 EEF1AKMT1Q8WVE0 214 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ABHD17AQ96GS6 310 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF285Q96NJ3 590 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 ZFYVE21Q9BQ24 234 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 DPH5Q9H2P9 285 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 SLC6A20Q9NP91 592 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 MRPS30Q9NP92 439 aaKnown RBP11.39□□□□□ -0.59
HMGN1-213ENST00000482192 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
HMGN1-213ENST00000482192 A0A0J9YVX5 310 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FITM1A5D6W6 292 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 DSCR3O14972 297 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 SLC16A5O15375 505 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 NRP2O60462 931 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 KLF7O75840 302 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 PIM1P11309 404 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FDXRP22570 491 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FOLR3P41439 243 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 VSX2P58304 361 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 IL2P60568 153 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 YBX1P67809 324 aaKnown RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 ABATP80404 500 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FASTKD3Q14CZ7 662 aaKnown RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FAM214AQ32MH5 1076 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 LACTB2Q53H82 288 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 WASHC2DQ5SRD0 308 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 THEMIS2Q5TEJ8 643 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 HECTD2Q5U5R9 776 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FAM69BQ5VUD6 431 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 MLIPQ5VWP3 458 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FRMPD2BQ6IN97 320 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FAM45BPQ6NSW5 357 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 SLC26A11Q86WA9 606 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 RAB43Q86YS6 212 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 LRRC56Q8IYG6 542 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FAM45AQ8TCE6 357 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 FKBP10Q96AY3 582 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 LINGO1Q96FE5 620 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 CCDC138Q96M89 665 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 PLCD4Q9BRC7 762 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 RAB17Q9H0T7 212 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 PARVBQ9HBI1 364 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 CCDC177Q9NQR7 707 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF71Q9NQZ8 489 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 ACSS2Q9NR19 701 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 CUTCQ9NTM9 273 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 MOCS1Q9NZB8 636 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 ADAMTS6Q9UKP5 1117 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
HMGN1-213ENST00000482192 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 PTRH2Q9Y3E5 179 aaKnown RBP11.38□□□□□ -0.59
HMGN1-213ENST00000482192 LOC105369274A0A096LPK9 316 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 LOC102723532A0A0G2JNH3 316 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 HYKKA2RU49 373 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 PABPN1LA6NDY0 278 aaKnown RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ARGFXA6NJG6 315 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 EIF3HO15372 352 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 SUV39H1O43463 412 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 DNAJB5O75953 348 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 HIST1H2AGP0C0S8 130 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 EZRP15311 586 aaKnown RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 HIST1H2ADP20671 130 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 IMPA1P29218 277 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 RELAQ04206 551 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 CKAP4Q07065 602 aaKnown RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ILF2Q12905 390 aaKnown RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 SLC9A5Q14940 896 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 DUPD1Q68J44 220 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF425Q6IV72 752 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 TCTN3Q6NUS6 607 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ATG14Q6ZNE5 492 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF572Q7Z3I7 529 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-213ENST00000482192 STRA8Q7Z7C7 330 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 OR4N4Q8N0Y3 316 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 OR2Y1Q8NGV0 311 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 PYROXD1Q8WU10 500 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 HIST1H2AHQ96KK5 128 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 IP6K3Q96PC2 410 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 OLFM1Q99784 485 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 HIST1H2AJQ99878 128 aa11.37□□□□□ -0.59
HMGN1-213ENST00000482192 H2AFJQ9BTM1 129 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms