RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DYRK4Q9NR20 520 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 THAP10Q9P2Z0 257 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 DLGAP4Q9Y2H0 992 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 STON1Q9Y6Q2 735 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 A0A1W2PP55 124 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 TCRBV5S2A0A599 114 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 LATO43561 262 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 LILRB5O75023 590 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 SEC22BO75396 215 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 FTH1P02794 183 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 PCCBP05166 539 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 C8GP07360 202 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 MTHFD1P11586 935 aaKnown RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 TACR1P25103 407 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 HALP42357 657 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 PRKG2Q13237 762 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 NAE1Q13564 534 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 DDX39BQ13838 428 aaKnown RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 EIF4HQ15056 248 aaKnown RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 TCEA2Q15560 299 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 FAM83HQ6ZRV2 1179 aaPredicted RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 CPA6Q8N4T0 437 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 ZNF513Q8N8E2 541 aaPredicted RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 EGLN2Q96KS0 407 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 VPS35Q96QK1 796 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 MTERF1Q99551 399 aaKnown RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 MKRN2Q9H000 416 aaKnown RBP14.02□□□□□ -0.16
CHD3-211ENST00000481999 SH2B3Q9UQQ2 575 aa14.02□□□□□ -0.16
CHD3-211ENST00000481999 SLC5A10A0PJK1 596 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 SOX1O00570 391 aaPredicted RBP14.02□□□□□ -0.17
CHD3-211ENST00000481999 AXIN1O15169 862 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 ENO2P09104 434 aaPredicted RBP14.02□□□□□ -0.17
CHD3-211ENST00000481999 EBLN1P0CF75 366 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 NCK1P16333 377 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 HTR1EP28566 365 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 PCSK6P29122 969 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 SELPLGQ14242 412 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 IMPG1Q17R60 797 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 SLC36A3Q495N2 470 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 NANOGP8Q6NSW7 305 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 PRR23BQ6ZRT6 265 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 LPCAT2Q7L5N7 544 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 PROSER1Q86XN7 944 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 ZNF786Q8N393 782 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 LIX1Q8N485 282 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 MCOLN3Q8TDD5 553 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 SELENOMQ8WWX9 145 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 PPM1MQ96MI6 270 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 MYOCQ99972 504 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 CCM2Q9BSQ5 444 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 NANOGQ9H9S0 305 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 CD93Q9NPY3 652 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 PLAGL1Q9UM63 463 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 OR1A2Q9Y585 309 aa14.02□□□□□ -0.17
CHD3-211ENST00000481999 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 TRIM64CA6NLI5 447 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ARNTLO00327 626 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 NPC1O15118 1278 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ACOX3O15254 700 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 PCDH8O95206 1070 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 LRATO95237 230 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 PAPLNO95428 1278 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 C1QCP02747 245 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 GNAO1P09471 354 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 CYP2A7P20853 494 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 VASPP50552 380 aaPredicted RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 GALK1P51570 392 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ESRRGP62508 458 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 EMX2Q04743 252 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 CHIT1Q13231 466 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 BIRC2Q13490 618 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 RAB30Q15771 203 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 FXNQ16595 210 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ATAT1Q5SQI0 421 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ZFAND4Q86XD8 727 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 ERI1Q8IV48 349 aaKnown RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 DPP10Q8N608 796 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 TMIGD2Q96BF3 282 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 PKP4Q99569 1192 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 MBNL1Q9NR56 388 aaKnown RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 HEBP1Q9NRV9 189 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 CLDND1Q9NY35 253 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 FADS3Q9Y5Q0 445 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 KCNE1BA0A087WTH5 132 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 GSTM1P09488 218 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 IMPA1P29218 277 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 MTPNP58546 118 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 GSTM4Q03013 218 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 TRMT11Q7Z4G4 463 aaKnown RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 RALGPS2Q86X27 583 aaPredicted RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 HID1Q8IV36 788 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 APIPQ96GX9 242 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 EBPLQ9BY08 206 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 OSBPL6Q9BZF3 934 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 DZANK1Q9NVP4 752 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 STOX2Q9P2F5 926 aaPredicted RBP14.01□□□□□ -0.17
CHD3-211ENST00000481999 SLC23A2Q9UGH3 650 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 V9GYQ6 96 aa14.01□□□□□ -0.17
CHD3-211ENST00000481999 MYO10Q9HD67 2058 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms