RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RNF215Q9Y6U7 377 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 SYCE1LA8MT33 242 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TK2O00142 265 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 KERAO60938 352 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 S100A6P06703 90 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 ALDH4A1P30038 563 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 AP1S2P56377 157 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 GRB7Q14451 532 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TMEM151BQ8IW70 566 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TMEM151AQ8N4L1 468 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 RAB42Q8N4Z0 105 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 CCDC63Q8NA47 563 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 OR4E2Q8NGC2 313 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 OR6C4Q8NGE1 309 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TCP10LQ8TDR4 215 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 JPH3Q8WXH2 748 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 CCDC138Q96M89 665 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 ATOH8Q96SQ7 321 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 PKP4Q99569 1192 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 EGFL8Q99944 293 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 CD274Q9NZQ7 290 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 FTSJ1Q9UET6 329 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 LNPEPQ9UIQ6 1025 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 PLLPQ9Y342 182 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 LY6G6EA0A0G2JKS1 128 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SUPT3HB4E1H0 165 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 TYROBPO43914 113 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 PFDN1O60925 122 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SUPT3HO75486 399 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SLC16A8O95907 504 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 ANXA5P08758 320 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 TPBGLP0DKB5 382 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 CKMT1AP12532 417 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 CSTF2P33240 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
HPS4-212ENST00000481910 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
HPS4-212ENST00000481910 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
HPS4-212ENST00000481910 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 MBOAT1Q6ZNC8 495 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 IL17FQ96PD4 163 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 NRTNQ99748 197 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SRMSQ9H3Y6 488 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 XKR8Q9H6D3 395 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 EMCNQ9ULC0 261 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 U3KQA8 63 aa11.22□□□□□ -0.61
HPS4-212ENST00000481910 PTPRZ1P23471 2315 aaPredicted RBP11.22□□□□□ -0.61
HPS4-212ENST00000481910 UBXN8O00124 270 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 PLIN3O60664 434 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 S100BP04271 92 aaPredicted RBP11.21□□□□□ -0.61
HPS4-212ENST00000481910 SBK3P0C264 359 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 UBL4AP11441 157 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 MTHFD2P13995 350 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 CKMT2P17540 419 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 HPDP32754 393 aaPredicted RBP11.21□□□□□ -0.61
HPS4-212ENST00000481910 PPM1FP49593 454 aaPredicted RBP11.21□□□□□ -0.61
HPS4-212ENST00000481910 RAB28P51157 221 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 CDKL1Q00532 357 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 GUSBP11Q6P575 273 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 ZNF554Q86TJ5 538 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 AMIGO1Q86WK6 493 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 SNX32Q86XE0 403 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 SYTL1Q8IYJ3 562 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 NAT6Q93015 286 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 TBC1D20Q96BZ9 403 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 FAM111AQ96PZ2 611 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 TRAPPC9Q96Q05 1148 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 TBC1D10AQ9BXI6 508 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 BRINP2Q9C0B6 783 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 UCK1Q9HA47 277 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 RP1P56715 2156 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 FRYLO94915 3013 aa11.21□□□□□ -0.61
HPS4-212ENST00000481910 TARM1B6A8C7 271 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 PRPF4O43172 522 aaKnown RBP eCLIP11.21□□□□□ -0.62
HPS4-212ENST00000481910 CBFA2T3O75081 653 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 PROCP04070 461 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.62
HPS4-212ENST00000481910 GFAPP14136 432 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 PNLIPP16233 465 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 AMD1P17707 334 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 TAC1P20366 129 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 SHMT2P34897 504 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 HSD17B2P37059 387 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 GPR3P46089 330 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 LIMK1P53667 647 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 ACTN3Q08043 901 aaPredicted RBP11.21□□□□□ -0.62
HPS4-212ENST00000481910 SPIDRQ14159 915 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 ARHGAP19Q14CB8 494 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 PFKFB4Q16877 469 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 ANKS6Q68DC2 871 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 ZNF438Q7Z4V0 828 aa11.21□□□□□ -0.62
HPS4-212ENST00000481910 C2orf73Q8N5S3 287 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms