RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CETN2P41208 172 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 GDF10P55107 478 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CASP6P55212 293 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 HSPA14Q0VDF9 509 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 P3H1Q32P28 736 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 FIGLAQ6QHK4 219 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF534Q76KX8 674 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 DCUN1D3Q8IWE4 304 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 METTL27Q8N6F8 245 aaPredicted RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 LRRC57Q8N9N7 239 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 OR11G2Q8NGC1 345 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 OR52K1Q8NGK4 314 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CFAP61Q8NHU2 1237 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 LKAAEAR1Q8TD35 194 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 HDAC10Q969S8 669 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 THOC3Q96J01 351 aaKnown RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF285Q96NJ3 590 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 SELENOSQ9BQE4 189 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 LACRTQ9GZZ8 138 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 LHPPQ9H008 270 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 TSPY26PQ9H489 355 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 MRM3Q9HC36 420 aaKnown RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 NXT1Q9UKK6 140 aaKnown RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 DOCK10Q96BY6 2186 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CACNA1CQ13936 2221 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 NCOA6Q14686 2063 aaPredicted RBP9□□□□□ -0.97
SMARCE1-210ENST00000481231 PCM1Q15154 2024 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 TCRBV7S2A1N4TA0A589 114 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 GRID2IPA4D2P6 1211 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 FITM1A5D6W6 292 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 VSTM2BA6NLU5 285 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 IQCF5A8MTL0 148 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 PSMD3O43242 534 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 CTSVO60911 334 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 GPC4O75487 556 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 MED26O95402 600 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 S1PR4O95977 384 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 GOT2P00505 430 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 RPN2P04844 631 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 C8BP07358 591 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 PIM1P11309 404 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 OR1D4P47884 311 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 NAP1L1P55209 391 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ARG2P78540 354 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 PMP22Q01453 160 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 RBPJQ06330 500 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 KLF1Q13351 362 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 MFAP5Q13361 173 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 GRM7Q14831 915 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 SF1Q15637 639 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 RBBP7Q16576 425 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.99□□□□□ -0.976e-7■■□□□ 13.5
SMARCE1-210ENST00000481231 TUBB8Q3ZCM7 444 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ZC3H12BQ5HYM0 836 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 TCTE1Q5JU00 501 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 YOD1Q5VVQ6 348 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 AFTPHQ6ULP2 937 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ISLR2Q6UXK2 745 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 UNC5DQ6UXZ4 953 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 DNAAF3Q8N9W5 541 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 OR2L8Q8NGY9 312 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC35B2Q8TB61 432 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 DENND1AQ8TEH3 1009 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC22A18Q96BI1 424 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 CALR3Q96L12 384 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 CRB3Q9BUF7 120 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 ENAMQ9NRM1 1142 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 INTS7Q9NVH2 962 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 PLA2G3Q9NZ20 509 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 REXO2Q9Y3B8 237 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 EPN1Q9Y6I3 576 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 COL6A5A8TX70 2615 aa8.99□□□□□ -0.97
SMARCE1-210ENST00000481231 KRT87PA6NCN2 255 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 GOLGA6L9A6NEM1 432 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 F8W8V4 182 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 RASGRF2O14827 1237 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 NRP2O60462 931 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 PTMAP06454 111 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 APOA4P06727 396 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ACPPP15309 386 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 FOSL1P15407 271 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 AOAHP28039 575 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 GRIA1P42261 906 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 VSX2P58304 361 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 ACVR1Q04771 509 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 CDH17Q12864 832 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 SEMA3AQ14563 771 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 INAQ16352 499 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 LONRF1Q17RB8 773 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 TSTD2Q5T7W7 516 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
SMARCE1-210ENST00000481231 LINC00523Q86TU6 105 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms