RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CABS1Q96KC9 395 aa12.71□□□□□ -0.37
NDC1-202ENST00000480952 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
NDC1-202ENST00000480952 MENTQ9BUN1 341 aa12.71□□□□□ -0.37
NDC1-202ENST00000480952 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
NDC1-202ENST00000480952 COQ3Q9NZJ6 369 aa12.71□□□□□ -0.37
NDC1-202ENST00000480952 LOC105369274A0A096LPK9 316 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 LOC102723532A0A0G2JNH3 316 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 F8W8V4 182 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 RASGRF2O14827 1237 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 PRPF4O43172 522 aaKnown RBP eCLIP12.7□□□□□ -0.38
NDC1-202ENST00000480952 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
NDC1-202ENST00000480952 FKBP9O95302 570 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 TPH1P17752 444 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 HSPA14Q0VDF9 509 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 PCOLCEQ15113 449 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 ANKRD20A2Q5SQ80 823 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 ANKRD20A1Q5TYW2 823 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 ANKRD20A3Q5VUR7 823 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 PACS1Q6VY07 963 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 DCUN1D3Q8IWE4 304 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 OR4N4Q8N0Y3 316 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 AMER2Q8N7J2 671 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 PHF10Q8WUB8 498 aaKnown RBP12.7□□□□□ -0.38
NDC1-202ENST00000480952 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
NDC1-202ENST00000480952 TMEM121Q9BTD3 319 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 KLHL1Q9NR64 748 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 C14orf105Q9NVL8 296 aa12.7□□□□□ -0.38
NDC1-202ENST00000480952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.7□□□□□ -0.38
NDC1-202ENST00000480952 hCG_1818297A0A087WSY0 165 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 LOC102723996A0A087X1L8 192 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 E9PLN8 166 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 PRRG2O14669 202 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 ASNA1O43681 348 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 AKR1B10O60218 316 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 FAM155BO75949 473 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 STK10O94804 968 aaKnown RBP12.69□□□□□ -0.38
NDC1-202ENST00000480952 GYPCP04921 128 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 EEF1DP29692 281 aaKnown RBP12.69□□□□□ -0.38
NDC1-202ENST00000480952 UBASH3AP57075 661 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 DSG2Q14126 1118 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 GRB7Q14451 532 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 CCDC181Q5TID7 509 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 TTC23LQ6PF05 361 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 DOLPP1Q86YN1 238 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 VRK3Q8IV63 474 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 RCOR2Q8IZ40 523 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 SLC22A15Q8IZD6 547 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 EID3Q8N140 333 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 IMMP1LQ96LU5 166 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 C10orf90Q96M02 699 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 PPP1R2P1Q96PQ5 205 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 MIPEPQ99797 713 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 VKORC1Q9BQB6 163 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 TUBB6Q9BUF5 446 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 HEMGNQ9BXL5 484 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 PPT2Q9UMR5 302 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
NDC1-202ENST00000480952 ANKHD1Q8IWZ3 2542 aaKnown RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 FAM221AA4D161 298 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 FOXO6A8MYZ6 492 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 ZNHIT1O43257 154 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 PSTPIP1O43586 416 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 OR1I1O60431 355 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TSPAN12O95859 305 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 ANXA5P08758 320 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 DRD2P14416 443 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 CD46P15529 392 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 MSNP26038 577 aaKnown RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 CCR7P32248 378 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TUBA3CQ13748 450 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 POU6F1Q14863 301 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 ASTE1Q2TB18 679 aaPredicted RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 ACER2Q5QJU3 275 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TUBA3EQ6PEY2 450 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TMEM205Q6UW68 189 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 UNC5DQ6UXZ4 953 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TMEM200AQ86VY9 491 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 RAB42Q8N4Z0 105 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 CHDHQ8NE62 594 aaPredicted RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 METTL21AQ8WXB1 218 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 MMABQ96EY8 250 aaPredicted RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 ZNF354BQ96LW1 612 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 SIGLEC12Q96PQ1 595 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TTC1Q99614 292 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 UTP23Q9BRU9 249 aaKnown RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 RAB11FIP5Q9BXF6 653 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 TGIF2Q9GZN2 237 aa12.68□□□□□ -0.38
NDC1-202ENST00000480952 MKKSQ9NPJ1 570 aaPredicted RBP12.68□□□□□ -0.38
NDC1-202ENST00000480952 ANKRD10Q9NXR5 420 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms