RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SPHK1Q9NYA1 384 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 KCNK4Q9NYG8 393 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 DNAJC15Q9Y5T4 150 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 KNL1Q8NG31 2342 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 OR6C74A6NCV1 312 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 ISM1B1AKI9 464 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 RRP9O43818 475 aaKnown RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 UGDHO60701 494 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 WFS1O76024 890 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 JUNP05412 331 aaKnown RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 C1GALT1C1LP0DN25 315 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 JUPP14923 745 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 VARSP26640 1264 aaKnown RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 PEBP1P30086 187 aaKnown RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 CASP2P42575 452 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 CCT8P50990 548 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 YBX1P67809 324 aaKnown RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 BTKQ06187 659 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 GGTA1PQ4G0N0 100 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 CATSPEREQ5SY80 951 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 VWA5B1Q5TIE3 1220 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 ICE2Q659A1 982 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 EPGNQ6UW88 154 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 TMPRSS11BQ86T26 416 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 C17orf64Q86WR6 236 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 ARL10Q8N8L6 244 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 KYQ8NBH2 561 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 CCDC197Q8NCU1 140 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 PRSS33Q8NF86 280 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 OR2A1Q8NGT9 310 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 TWIST2Q8WVJ9 160 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 PRR11Q96HE9 360 aaPredicted RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 PPP1R36Q96LQ0 422 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 MAGEB10Q96LZ2 347 aaPredicted RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 EBF4Q9BQW3 602 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 TBC1D10AQ9BXI6 508 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.96■□□□□ 0.31
UPF3A-206ENST00000480362 UCK1Q9HA47 277 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 NLGN3Q9NZ94 848 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 PCDH15Q96QU1 1955 aa16.96■□□□□ 0.31
UPF3A-206ENST00000480362 KCNE1BA0A087WTH5 132 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PIPSLA2A3N6 862 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 FAM221BA6H8Z2 402 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TRPC5OSA6NMA1 111 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 FFAR3O14843 346 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 GPR42O15529 346 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 DIAPH2O60879 1101 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 CHEK2O96017 543 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 CDH1P12830 882 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 ENGP17813 658 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 POLR2CP19387 275 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 CD22P20273 847 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 HNF4AP41235 474 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 IDH3AP50213 366 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PRDX1Q06830 199 aaKnown RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TCF15Q12870 199 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TBCCQ15814 346 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 CPSF6Q16630 551 aaKnown RBP eCLIP16.95■□□□□ 0.32e-7■■■□□ 16.2
UPF3A-206ENST00000480362 TCHHL1Q5QJ38 904 aaPredicted RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PLA2G2CQ5R387 149 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 ATG9BQ674R7 924 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TCEAL6Q6IPX3 200 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 GRHL2Q6ISB3 625 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 NXPE4Q6UWF7 544 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 EFL1Q7Z2Z2 1120 aaKnown RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 SLC35F3Q8IY50 421 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 OR10G6Q8NH81 332 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TCEAL3Q969E4 200 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PTCD3Q96EY7 689 aaKnown RBP16.95■□□□□ 0.3
UPF3A-206ENST00000480362 SLC38A3Q99624 504 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PRRX2Q99811 253 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TWSG1Q9GZX9 223 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 TUBB1Q9H4B7 451 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 BTRCQ9Y297 605 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 ARL2BPQ9Y2Y0 163 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 MUC3AQ02505 3323 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 A0A0C4DFX4 3053 aa16.95■□□□□ 0.3
UPF3A-206ENST00000480362 PCM1Q15154 2024 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 RHPN2P1A8MT19 583 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 MANBAO00462 879 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 DLL1O00548 723 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 TRIM38O00635 465 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 HGSO14964 777 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-206ENST00000480362 PIP5K1BO14986 540 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 ALPPL2P10696 532 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 E2F2Q14209 437 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 KIR2DS3Q14952 304 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 ZRSR2Q15696 482 aaKnown RBP16.94■□□□□ 0.3
UPF3A-206ENST00000480362 SLC9B1Q4ZJI4 515 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 SCIMPQ6UWF3 145 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 DDIASQ8IXT1 998 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 CACNA2D3Q8IZS8 1091 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 CHCHD4Q8N4Q1 142 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 SUMF1Q8NBK3 374 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 SLC22A18Q96BI1 424 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 WDR34Q96EX3 536 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 DUSP23Q9BVJ7 150 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms