RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CELA2AP08217 269 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 NF1P21359 2839 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 CTNNA2P26232 953 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 HSPA14Q0VDF9 509 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 SPARCL1Q14515 664 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 NCOA6Q14686 2063 aaPredicted RBP15.3■□□□□ 0.04
DDX56-210ENST00000479440 POU6F1Q14863 301 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 PCOLCEQ15113 449 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 CDSNQ15517 529 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 FRMPD2BQ6IN97 320 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 MEX3BQ6ZN04 569 aaKnown RBP15.3■□□□□ 0.04
DDX56-210ENST00000479440 SPPL2CQ8IUH8 684 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 LMNTD1Q8N9Z9 388 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 CFAP61Q8NHU2 1237 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 ADAMTS18Q8TE60 1221 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 PHF10Q8WUB8 498 aaKnown RBP15.3■□□□□ 0.04
DDX56-210ENST00000479440 C10orf90Q96M02 699 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 TUBB6Q9BUF5 446 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 ZNF700Q9H0M5 742 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 SPTLC3Q9NUV7 552 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 TRPC4Q9UBN4 977 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 CIDEBQ9UHD4 219 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 NEU2Q9Y3R4 380 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 PCDHGB6Q9Y5F9 930 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 KLK4Q9Y5K2 254 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 SNRNP200O75643 2136 aaKnown RBP15.29■□□□□ 0.04
DDX56-210ENST00000479440 LOC102723996A0A087X1L8 192 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 A0A0J9YVX5 310 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 RCCD1A6NED2 376 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 VPS26AO75436 327 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 NADKO95544 446 aaPredicted RBP15.29■□□□□ 0.04
DDX56-210ENST00000479440 ANXA5P08758 320 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 FOXN2P32314 431 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 EMP3P54852 163 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 CSNK1G2P78368 415 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 ALDH6A1Q02252 535 aaKnown RBP15.29■□□□□ 0.04
DDX56-210ENST00000479440 TRIM14Q14142 442 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 GRB7Q14451 532 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 TCEAL1Q15170 157 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 TMED2Q15363 201 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 LAPTM4BQ86VI4 370 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 ACBD4Q8NC06 268 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 CA5BP1Q8WTZ4 195 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 ASZ1Q8WWH4 475 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 CCDC42Q96M95 316 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 MIPEPQ99797 713 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 ZFYVE21Q9BQ24 234 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 HEMGNQ9BXL5 484 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 LRRC40Q9H9A6 602 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 MKKSQ9NPJ1 570 aaPredicted RBP15.29■□□□□ 0.04
DDX56-210ENST00000479440 STMN3Q9NZ72 180 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 MRFAP1Q9Y605 127 aa15.29■□□□□ 0.04
DDX56-210ENST00000479440 SETD2Q9BYW2 2564 aaPredicted RBP15.29■□□□□ 0.04
DDX56-210ENST00000479440 OR51F1A6NGY5 319 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 APOA4P06727 396 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 TPM3P06753 285 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 RBP3P10745 1247 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 ABOP16442 354 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 PSMB5P28074 263 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 CCR7P32248 378 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 ART1P52961 327 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 EIF3EP60228 445 aaKnown RBP15.28■□□□□ 0.04
DDX56-210ENST00000479440 DARS2Q6PI48 645 aaKnown RBP15.28■□□□□ 0.04
DDX56-210ENST00000479440 AFTPHQ6ULP2 937 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 KLHDC8BQ8IXV7 354 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 FAM98AQ8NCA5 519 aaKnown RBP15.28■□□□□ 0.04
DDX56-210ENST00000479440 OR2L3Q8NG85 312 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 OR8K1Q8NGG5 319 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 GSDMBQ8TAX9 411 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 ACTL9Q8TC94 416 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 TGIF2Q9GZN2 237 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 COQ3Q9NZJ6 369 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 ALG6Q9Y672 507 aa15.28■□□□□ 0.04
DDX56-210ENST00000479440 LOC105369274A0A096LPK9 316 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 PHF2O75151 1096 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 GPC4O75487 556 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 TSPAN12O95859 305 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 MARCKSL1P49006 195 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 PRTGQ2VWP7 1150 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 TMEM205Q6UW68 189 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 VRK3Q8IV63 474 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 OR4N4Q8N0Y3 316 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 GHDCQ8N2G8 530 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 TMEM178AQ8NBL3 297 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 RAD51AP1Q96B01 352 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 MMABQ96EY8 250 aaPredicted RBP15.27■□□□□ 0.04
DDX56-210ENST00000479440 ZNF354BQ96LW1 612 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 TREX2Q9BQ50 279 aaPredicted RBP15.27■□□□□ 0.04
DDX56-210ENST00000479440 IFNKQ9P0W0 207 aa15.27■□□□□ 0.04
DDX56-210ENST00000479440 CNTRLQ7Z7A1 2325 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 DCHS2Q6V1P9 2916 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 OR2A25A4D2G3 310 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 ASPDHA6ND91 283 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 FOXO6A8MYZ6 492 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 NPIPA5E9PKD4 350 aa15.26■□□□□ 0.03
DDX56-210ENST00000479440 E9PLN8 166 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms