RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 UPRTQ96BW1 309 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 HBEGFQ99075 208 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 MAGIXQ9H6Y5 334 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 TREX1Q9NSU2 369 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 CMAHPQ9Y471 501 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 ACTL7AQ9Y615 435 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 KIAA1217Q5T5P2 1943 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 CNPP09543 421 aaKnown RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 G6PDP11413 515 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 FOSL1P15407 271 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 MED22Q15528 200 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 SLC14A2Q15849 920 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 SUPT20HL1Q3ZLR7 823 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 GTDC1Q4AE62 458 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 FAM171A1Q5VUB5 890 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 ADGRG3Q86Y34 549 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 OR8K5Q8NH50 307 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 ZNF431Q8TF32 576 aaPredicted RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 KLHL6Q8WZ60 621 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 RBPMSQ93062 196 aaKnown RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 FAM149B1Q96BN6 582 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 TEPSINQ96N21 525 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 LINC00052Q96N35 136 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 COL21A1Q96P44 957 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 HEXA-AS1Q9H8Q6 139 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 RPF1Q9H9Y2 349 aaKnown RBP20.67■□□□□ 0.9
SDF4-206ENST00000478938 ABCB9Q9NP78 766 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 RAD18Q9NS91 495 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 NLKQ9UBE8 527 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 HRH3Q9Y5N1 445 aa20.67■□□□□ 0.9
SDF4-206ENST00000478938 CCL22O00626 93 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 VPS26AO75436 327 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 RAF1P04049 648 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 HOXB3P14651 431 aaPredicted RBP20.66■□□□□ 0.9
SDF4-206ENST00000478938 CD1DP15813 335 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 EPHA5P54756 1037 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 NFE2L1Q14494 772 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 GPR68Q15743 365 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 PYDC2Q56P42 97 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 C10orf111Q8N326 155 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 PYURFQ96I23 114 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 C1orf74Q96LT6 269 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 QRFPRQ96P65 431 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 PITX2Q99697 317 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 SAV1Q9H4B6 383 aaPredicted RBP20.66■□□□□ 0.9
SDF4-206ENST00000478938 IL20Q9NYY1 176 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 SPASTQ9UBP0 616 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 ENOPH1Q9UHY7 261 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 MGAT4AQ9UM21 535 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 TNPO3Q9Y5L0 923 aaKnown RBP20.66■□□□□ 0.9
SDF4-206ENST00000478938 HCRTO43612 131 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 MAP2K3P46734 347 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 BAMBIQ13145 260 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 GRK1Q15835 563 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 GPR139Q6DWJ6 353 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 OR2T5Q6IEZ7 315 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 MPZL3Q6UWV2 235 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 OR2T29Q8NH02 315 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 KCNC2Q96PR1 638 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 DPCDQ9BVM2 203 aaPredicted RBP20.66■□□□□ 0.9
SDF4-206ENST00000478938 IKZF3Q9UKT9 509 aa20.66■□□□□ 0.9
SDF4-206ENST00000478938 PCDH17O14917 1159 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 AOC2O75106 756 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ZNF682O95780 498 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 RRASP10301 218 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 TGFB3P10600 412 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 PAMP19021 973 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ST3GAL4Q11206 333 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 FGFBP1Q14512 234 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 SSX1Q16384 188 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 AP2M1Q96CW1 435 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 SLC6A17Q9H1V8 727 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ARNTLO00327 626 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 WISP3O95389 354 aaPredicted RBP20.65■□□□□ 0.9
SDF4-206ENST00000478938 RETP07949 1114 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ADRA2AP08913 450 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 TSPAN19P0C672 248 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ARSBP15848 533 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 POLR2GP62487 172 aaKnown RBP eCLIP20.65■□□□□ 0.9
SDF4-206ENST00000478938 EXOSC2Q13868 293 aaKnown RBP20.65■□□□□ 0.9
SDF4-206ENST00000478938 WSCD2Q2TBF2 565 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 C10orf62Q5T681 223 aaPredicted RBP20.65■□□□□ 0.9
SDF4-206ENST00000478938 KIAA0930Q6ICG6 404 aaPredicted RBP20.65■□□□□ 0.9
SDF4-206ENST00000478938 ZDHHC17Q8IUH5 632 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 MSRB3Q8IXL7 192 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 RNF149Q8NC42 400 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 SLC37A3Q8NCC5 494 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 CELF6Q96J87 481 aaKnown RBP20.65■□□□□ 0.9
SDF4-206ENST00000478938 B3GALT6Q96L58 329 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 WDFY2Q96P53 400 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ZNF302Q9NR11 478 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 SLC25A37Q9NYZ2 338 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 PGAP2Q9UHJ9 254 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 ZNF225Q9UK10 706 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 NME7Q9Y5B8 376 aa20.65■□□□□ 0.9
SDF4-206ENST00000478938 FABP12A6NFH5 140 aa20.64■□□□□ 0.9
SDF4-206ENST00000478938 SGTAO43765 313 aa20.64■□□□□ 0.9
SDF4-206ENST00000478938 PLOD3O60568 738 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms