RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RASSF9O75901 435 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 WDR47O94967 919 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 CCNDBP1O95273 360 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 C9P02748 559 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 THRAP10827 490 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 CDH3P22223 829 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 MPSTP25325 297 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 SLC6A12P48065 614 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 PDX1P52945 283 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 ALDH18A1P54886 795 aaKnown RBP14.78□□□□□ -0.04
SEC13-215ENST00000477547 SQSTM1Q13501 440 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 ZXDCQ2QGD7 858 aaPredicted RBP14.78□□□□□ -0.04
SEC13-215ENST00000477547 TTMPQ5BVD1 217 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 PHF19Q5T6S3 580 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 TMEM71Q6P5X7 295 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 LRRC70Q7Z2Q7 622 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 B3GNT8Q7Z7M8 397 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 SLITRK4Q8IW52 837 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 FLVCR1-AS1Q8TAF5 88 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 RDH11Q8TC12 318 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 TCP10LQ8TDR4 215 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 PKNOX2Q96KN3 472 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 CCDC74BQ96LY2 380 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 FAM111AQ96PZ2 611 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 OR2A14Q96R47 310 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 MIPEPQ99797 713 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 SGPP1Q9BX95 441 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 SLC17A7Q9P2U7 560 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 PTBP2Q9UKA9 531 aaKnown RBP14.78□□□□□ -0.04
SEC13-215ENST00000477547 PCDHB11Q9Y5F2 797 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 TARM1B6A8C7 271 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 TAPBPO15533 448 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 KIF1CO43896 1103 aaKnown RBP14.77□□□□□ -0.04
SEC13-215ENST00000477547 PRICKLE3O43900 615 aaPredicted RBP14.77□□□□□ -0.04
SEC13-215ENST00000477547 KLK8O60259 260 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 MYL2P10916 166 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PRDX3P30048 256 aaKnown RBP14.77□□□□□ -0.04
SEC13-215ENST00000477547 AGTR2P50052 363 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 NFKB2Q00653 900 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 SF1Q15637 639 aaKnown RBP14.77□□□□□ -0.04
SEC13-215ENST00000477547 SLC5A12Q1EHB4 618 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 CDCP2Q5VXM1 449 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 ICE2Q659A1 982 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 ZYG11AQ6WRX3 759 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PRSS42Q7Z5A4 293 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 FAM20CQ8IXL6 584 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 KLHDC8AQ8IYD2 350 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 TMEM151AQ8N4L1 468 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 ARMC2Q8NEN0 867 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 OR2L3Q8NG85 312 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 OR2A1Q8NGT9 310 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 ESAMQ96AP7 390 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PHF21BQ96EK2 531 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PPM1MQ96MI6 270 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 TMEM74Q96NL1 305 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 DEPDC7Q96QD5 511 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 MAP3K3Q99759 626 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 SELENOSQ9BQE4 189 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PITPNM3Q9BZ71 974 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 SEMA6CQ9H3T2 930 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 PLLPQ9Y342 182 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 ASB1Q9Y576 335 aa14.77□□□□□ -0.04
SEC13-215ENST00000477547 FLNBO75369 2602 aaKnown RBP14.77□□□□□ -0.05
SEC13-215ENST00000477547 CELSR3Q9NYQ7 3312 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 IGHV5-10-1A0A0J9YXX1 117 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 A8MU76 341 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 HMGB1P1B2RPK0 211 aaPredicted RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 STX16-NPEPL1H3BU86 382 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 STX16O14662 325 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 PRPF4O43172 522 aaKnown RBP eCLIP14.76□□□□□ -0.05
SEC13-215ENST00000477547 CCNT2O60583 730 aaKnown RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 STK16O75716 305 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 PVRP15151 417 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 ATP5F1P24539 256 aaPredicted RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 EEF1DP29692 281 aaKnown RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 CMPK1P30085 196 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 GDF5P43026 501 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 INHBCP55103 352 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 CACHD1Q5VU97 1274 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 LCTLQ6UWM7 567 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 ZNF574Q6ZN55 896 aaPredicted RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 RAB44Q7Z6P3 723 aaPredicted RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 THOC6Q86W42 341 aaKnown RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 SNX31Q8N9S9 440 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 HAUS8Q9BT25 410 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 KLHL25Q9H0H3 589 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 PCBD2Q9H0N5 130 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 SLC6A20Q9NP91 592 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 MRPS30Q9NP92 439 aaKnown RBP14.76□□□□□ -0.05
SEC13-215ENST00000477547 KCNK9Q9NPC2 374 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 DNAJC11Q9NVH1 559 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 SOHLH2Q9NX45 425 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 OPTCQ9UBM4 332 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 CLCA2Q9UQC9 943 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 SH2B3Q9UQQ2 575 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 SLC22A14Q9Y267 594 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 DYRK1BQ9Y463 629 aa14.76□□□□□ -0.05
SEC13-215ENST00000477547 TMEM120BA0PK00 339 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 LRRC14BA6NHZ5 514 aa14.75□□□□□ -0.05
SEC13-215ENST00000477547 G3V2L1 256 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms