RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TLN2Q9Y4G6 2542 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 A0A0J9YVX5 310 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 H7C0C1 242 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FFAR3O14843 346 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FANCGO15287 622 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 GPR42O15529 346 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 SPOPO43791 374 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 NRP2O60462 931 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ZRANB2O95218 330 aaKnown RBP eCLIP10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FKBP9O95302 570 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FBLP22087 321 aaKnown RBP10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ATP5OP48047 213 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ART1P52961 327 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 CSE1LP55060 971 aaKnown RBP10.8□□□□□ -0.68
BRCA1-213ENST00000476777 PRPSAP1Q14558 356 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ITIH4Q14624 930 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 IQCB1Q15051 598 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 PCOLCEQ15113 449 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 MUM1Q2TAK8 710 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ANKRD20A2Q5SQ80 823 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ANKRD20A1Q5TYW2 823 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ANKRD20A3Q5VUR7 823 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 NEK10Q6ZWH5 1172 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 VRK3Q8IV63 474 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 DCUN1D3Q8IWE4 304 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 RHOT2Q8IXI1 618 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 MMP21Q8N119 569 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
BRCA1-213ENST00000476777 IMMP1LQ96LU5 166 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 TMEM121Q9BTD3 319 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 ZNF700Q9H0M5 742 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 TSPAN10Q9H1Z9 355 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-213ENST00000476777 IMPACTQ9P2X3 320 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 TRPC4Q9UBN4 977 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 PCDHGB6Q9Y5F9 930 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FAM169AQ9Y6X4 670 aa10.8□□□□□ -0.68
BRCA1-213ENST00000476777 FAM227AF5H4B4 570 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 APOC4-APOC2K7ER74 178 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 ADAM10O14672 748 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 RASGRF2O14827 1237 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 OR1I1O60431 355 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 APOC2P02655 101 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 RPN2P04844 631 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 EIF2S1P05198 315 aaKnown RBP10.79□□□□□ -0.68
BRCA1-213ENST00000476777 OR56A5P0C7T3 313 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 ICAM2P13598 275 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 CD99P14209 185 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 TPH1P17752 444 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 IGFBP2P18065 325 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 PSMA3P25788 255 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 CCR7P32248 378 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 EFNA3P52797 238 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 UBASH3AP57075 661 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 AP2B1P63010 937 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 ZNF33BQ06732 778 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 DSG2Q14126 1118 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 LONRF1Q17RB8 773 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 PRTGQ2VWP7 1150 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 TMEM205Q6UW68 189 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 SIAH3Q8IW03 269 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 KLHDC8BQ8IXV7 354 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 CFAP61Q8NHU2 1237 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 AGAP11Q8TF27 550 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 PHF10Q8WUB8 498 aaKnown RBP10.79□□□□□ -0.68
BRCA1-213ENST00000476777 STYXQ8WUJ0 223 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 DMRTA2Q96SC8 542 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 HEMGNQ9BXL5 484 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 C14orf105Q9NVL8 296 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 TNFRSF10DQ9UBN6 386 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 TEKT2Q9UIF3 430 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 STAB1Q9NY15 2570 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 COL6A5A8TX70 2615 aa10.79□□□□□ -0.68
BRCA1-213ENST00000476777 ZNF407Q9C0G0 2248 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-213ENST00000476777 ASPDHA6ND91 283 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 OR51F1A6NGY5 319 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 NPIPA5E9PKD4 350 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 TTI1O43156 1089 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 ZNHIT1O43257 154 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 AKR1B10O60218 316 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 GPC4O75487 556 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 MLYCDO95822 493 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 HEXBP07686 556 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
BRCA1-213ENST00000476777 PSMB5P28074 263 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 FOXN2P32314 431 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 SLC26A3P40879 764 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 MARCKSL1P49006 195 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 ALDH6A1Q02252 535 aaKnown RBP10.78□□□□□ -0.68
BRCA1-213ENST00000476777 HSPA14Q0VDF9 509 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 FBXO42Q6P3S6 717 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 UNC5DQ6UXZ4 953 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 RNF44Q7L0R7 432 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 DOLPP1Q86YN1 238 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms