RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SLC44A1Q8WWI5 657 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 ZUFSPQ96AP4 578 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 ALKBH8Q96BT7 664 aaKnown RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 PTERQ96BW5 349 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 PYCR2Q96C36 320 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 UBXN10Q96LJ8 280 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CCNL2Q96S94 520 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 RUFY1Q96T51 708 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CYTH2Q99418 400 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 DPH7Q9BTV6 452 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CHRNA10Q9GZZ6 450 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 FANCEQ9HB96 536 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 MRPS18BQ9Y676 258 aaKnown RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 FER1L5A0AVI2 2057 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 PTPRQQ9UMZ3 2332 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 KMT2BQ9UMN6 2715 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 LOC105369274A0A096LPK9 316 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 A0A0J9YVX5 310 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR2A25A4D2G3 310 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 POC1B-GALNT4F8VUJ3 575 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 TERTO14746 1132 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 RIPK2O43353 540 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF749O43361 778 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR2B3O76000 313 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 CMPK1P30085 196 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 RORAP35398 523 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 KCNC1P48547 511 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PMS2P54278 862 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ITGA1P56199 1179 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 CXADRP78310 365 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PRDX1Q06830 199 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 NAE1Q13564 534 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR4D1Q15615 310 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 FBXO48Q5FWF7 155 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 MANEAQ5SRI9 462 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 THEMIS2Q5TEJ8 643 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ARHGAP40Q5TG30 622 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 FRMPD2BQ6IN97 320 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF425Q6IV72 752 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PAQR7Q86WK9 346 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PLD3Q8IV08 490 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 MCATQ8IVS2 390 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR4N4Q8N0Y3 316 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 DTWD1Q8N5C7 304 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF655Q8N720 491 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR8K5Q8NH50 307 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR56A3Q8NH54 315 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 TSPAN17Q96FV3 270 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 MED8Q96G25 268 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 OR4K3Q96R72 315 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PAFAH2Q99487 392 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PLCD4Q9BRC7 762 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 DERL2Q9GZP9 239 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PRORYQ9H606 182 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 LHX9Q9NQ69 397 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 IGSF5Q9NSI5 407 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 INTS7Q9NVH2 962 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ARL15Q9NXU5 204 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 EURLQ9NYK6 297 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 IL17BQ9UHF5 180 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 SERTAD3Q9UJW9 196 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 RALYQ9UKM9 306 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PLCL2Q9UPR0 1127 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 KLK4Q9Y5K2 254 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ANKRD11Q6UB99 2663 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 PKD1L2Q7Z442 2459 aa9.3□□□□□ -0.92
HDAC3-208ENST00000476739 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
HDAC3-208ENST00000476739 ZZEF1O43149 2961 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 A0A087WUV0 522 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 NCF1BA6NI72 391 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ZNF839A8K0R7 811 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 NCF1CA8MVU1 366 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 TARM1B6A8C7 271 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 E7EQ34 232 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 H7BY64 318 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 K7ENP7 123 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 MAP3K7O43318 606 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 CPNE3O75131 537 aaKnown RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 FKBP9O95302 570 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 SLU7O95391 586 aaKnown RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 MED26O95402 600 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ALDOAP04075 364 aaKnown RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 C2P06681 752 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ENO2P09104 434 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-208ENST00000476739 ATXN8OSP0DMR3 200 aa9.29□□□□□ -0.92
HDAC3-208ENST00000476739 NCF1P14598 390 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms