RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	ADCK2	Q7Z695	626 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	HPS6	Q86YV9	775 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	CPNE9	Q8IYJ1	553 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	GPATCH11	Q8N954	259 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	SLC38A9	Q8NBW4	561 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	OR2A1	Q8NGT9	310 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	ATL1	Q8WXF7	558 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	ABHD17A	Q96GS6	310 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	MS4A3	Q96HJ5	214 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	VPS39	Q96JC1	886 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	CCDC138	Q96M89	665 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	GBP5	Q96PP8	586 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	PKP4	Q99569	1192 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	TRIM51	Q9BSJ1	452 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	DPH7	Q9BTV6	452 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	SPRTN	Q9H040	489 aa	Predicted RBP	9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	CCDC177	Q9NQR7	707 aa	Predicted RBP	9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	CUTC	Q9NTM9	273 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	WHRN	Q9P202	907 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	DHCR7	Q9UBM7	475 aa	Known RBP	9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	TAC3	Q9UHF0	121 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	CDC14A	Q9UNH5	594 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	PCDHGB7	Q9Y5F8	929 aa		9.8	□□□□□ -0.84
CCM2-208	ENST00000476594	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
CCM2-208	ENST00000476594		A0A0J9YVX5	310 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ARGFX	A6NJG6	315 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	GFY	I3L273	518 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PRICKLE3	O43900	615 aa	Predicted RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SLC16A8	O95907	504 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	AHSG	P02765	367 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ENO2	P09104	434 aa	Predicted RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PSMB5	P28074	263 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	GRK3	P35626	688 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	EMP3	P54852	163 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SLC12A2	P55011	1212 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	AP1S2	P56377	157 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	VSX2	P58304	361 aa	Predicted RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	RELA	Q04206	551 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PRDX1	Q06830	199 aa	Known RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	MGAT5	Q09328	741 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	KLRB1	Q12918	225 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	NDUFA9	Q16795	377 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	CCSMST1	Q4G0I0	132 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	NKAIN1	Q4KMZ8	207 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	TEDDM1	Q5T9Z0	273 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ICE2	Q659A1	982 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ZNF385C	Q66K41	422 aa	Predicted RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	STEAP4	Q687X5	459 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	FCRL6	Q6DN72	434 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ZNF549	Q6P9A3	640 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SUSD1	Q6UWL2	747 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SLC26A11	Q86WA9	606 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ZBED8	Q8IZ13	594 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	AGGF1	Q8N302	714 aa	eCLIP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	TBC1D19	Q8N5T2	526 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	TEX19	Q8NA77	164 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	CLEC1A	Q8NC01	280 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	FBXO36	Q8NEA4	188 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SPATA4	Q8NEY3	305 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	OR2Y1	Q8NGV0	311 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	GIMAP7	Q8NHV1	300 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PYROXD1	Q8WU10	500 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ZNF480	Q8WV37	535 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PTER	Q96BW5	349 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	MVB12A	Q96EY5	273 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	LINGO1	Q96FE5	620 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	NDN	Q99608	321 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PLCD4	Q9BRC7	762 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ERP44	Q9BS26	406 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SLC25A23	Q9BV35	468 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ACAT2	Q9BWD1	397 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	FAM129A	Q9BZQ8	928 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PHACTR1	Q9C0D0	580 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ING2	Q9H160	280 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PARVB	Q9HBI1	364 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	ENAM	Q9NRM1	1142 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	KLHL20	Q9Y2M5	609 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SNX24	Q9Y343	169 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PTRH2	Q9Y3E5	179 aa	Known RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	PCDHGA9	Q9Y5G4	932 aa	Known RBP	9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	TEX264	Q9Y6I9	313 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	CFAP46	Q8IYW2	2715 aa		9.79	□□□□□ -0.84
CCM2-208	ENST00000476594	SEC16A	O15027	2179 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	OR2A25	A4D2G3	310 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	FITM1	A5D6W6	292 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594		E7ENX8	843 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594		E7ESA3	106 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594		H3BMH7	237 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	BANF1	O75531	89 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	ALPP	P05187	535 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	EIF2S1	P05198	315 aa	Known RBP	9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	GSTA2	P09210	222 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	SPTB	P11277	2137 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	OTX2	P32243	289 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	RPL21	P46778	160 aa	Known RBP	9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	PGD	P52209	483 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	TAP2	Q03519	686 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	OCA2	Q04671	838 aa		9.78	□□□□□ -0.84
CCM2-208	ENST00000476594	IL10RA	Q13651	578 aa		9.78	□□□□□ -0.84

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