RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 A0A0J9YY10 115 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 NCF1BA6NI72 391 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 NCF1CA8MVU1 366 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 G3V2L1 256 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 PLIN3O60664 434 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 ZBTB11O95625 1053 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MYZAPP0CAP1 466 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 EBLN1P0CF75 366 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 NCF1P14598 390 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 NELFEP18615 380 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 GGT5P36269 586 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 GDF5P43026 501 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 ETV4P43268 484 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SLC6A12P48065 614 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 TSNAXIP1Q2TAA8 658 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 AGTRAPQ6RW13 159 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 BMPERQ8N8U9 685 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 PYCR2Q96C36 320 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MOCOSQ96EN8 888 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 RNF31Q96EP0 1072 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 APOPT1Q96IL0 206 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 CTRCQ99895 268 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MRPL57Q9BQC6 102 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 ACAT2Q9BWD1 397 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SGPP1Q9BX95 441 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 PITPNM3Q9BZ71 974 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 CENPHQ9H3R5 247 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 APMAPQ9HDC9 416 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SIDT1Q9NXL6 827 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SLC39A1Q9NY26 324 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 DCDC2Q9UHG0 476 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 RNF112Q9ULX5 631 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 KLHL20Q9Y2M5 609 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 PLLPQ9Y342 182 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SDK2Q58EX2 2172 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 CCDC189A1A4V9 331 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 NRP2O60462 931 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 PRAMEF10O60809 474 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 HIST1H2AGP0C0S8 130 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 EPORP19235 508 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 HIST1H2ADP20671 130 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MAGP20916 626 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 OAS2P29728 719 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 RPA3P35244 121 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MLLT3P42568 568 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 HSD11B2P80365 405 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 FRA10AC1Q70Z53 315 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 KLHDC8AQ8IYD2 350 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 LSMEM2Q8N112 164 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 C19orf47Q8N9M1 422 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 ZCCHC14Q8WYQ9 949 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 USP7Q93009 1102 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 EXT2Q93063 718 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SLC41A2Q96JW4 573 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 HIST1H2AHQ96KK5 128 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SLC46A1Q96NT5 459 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 TRAPPC9Q96Q05 1148 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 OR6C1Q96RD1 312 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MIPEPQ99797 713 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 HIST1H2AJQ99878 128 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 H2AFJQ9BTM1 129 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 MRPL46Q9H2W6 279 aaKnown RBP13.86□□□□□ -0.19
CCNL1-217ENST00000476367 THSD1Q9NS62 852 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 SEMA5BQ9P283 1151 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 ACTL7BQ9Y614 415 aa13.86□□□□□ -0.19
CCNL1-217ENST00000476367 APC2O95996 2303 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 ZNF839A8K0R7 811 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 DLX3O60479 287 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 PRAMEF4O60810 478 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 GLRA3O75311 464 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 DXOO77932 396 aaKnown RBP13.85□□□□□ -0.19
CCNL1-217ENST00000476367 RBP1P09455 135 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 FOLR1P15328 257 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 NPPBP16860 134 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 MAGOHP61326 146 aaKnown RBP13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TBPL1P62380 186 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TUBB3Q13509 450 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 NAE1Q13564 534 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 SLC5A12Q1EHB4 618 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 CDKL4Q5MAI5 379 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 THEMIS2Q5TEJ8 643 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 PRAMEF9Q5VWM5 478 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 CROCCP2Q86T23 111 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 KMT5CQ86Y97 462 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 CARFQ8N187 725 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TCP10LQ8TDR4 215 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 SMPDL3AQ92484 453 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
CCNL1-217ENST00000476367 MED8Q96G25 268 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TRIM54Q9BYV2 358 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 SYNPO2LQ9H987 977 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 FOXJ2Q9P0K8 574 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 TAC3Q9UHF0 121 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 BTRCQ9Y297 605 aa13.85□□□□□ -0.19
CCNL1-217ENST00000476367 B3GALT1Q9Y5Z6 326 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms