RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 C5orf51A6NDU8 294 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 HAS3O00219 553 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SCDO00767 359 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 TSPAN9O75954 239 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 ZNF3P17036 446 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SCN1BQ07699 218 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 ANKRD26P1Q6NSI1 321 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SUSD1Q6UWL2 747 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SLC29A4Q7RTT9 530 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 ZNF527Q8NB42 609 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 OVCA2Q8WZ82 227 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 TMED9Q9BVK6 235 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 MAN2B2Q9Y2E5 1009 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 SMAD9O15198 467 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 HOXB6P17509 224 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 ATP5A1P25705 553 aaKnown RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 CRISP3P54108 245 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 KLHL26Q53HC5 615 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 CDKN2AIPNLQ96HQ2 116 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 NDC1Q9BTX1 674 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 C11orf49Q9H6J7 331 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 MKKSQ9NPJ1 570 aaPredicted RBP10.71□□□□□ -0.69
VAPB-204ENST00000475243 UTS2RQ9UKP6 389 aa10.71□□□□□ -0.69
VAPB-204ENST00000475243 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 RB1P06400 928 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 GKP32189 559 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 OR12D2P58182 307 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 SLC3A1Q07837 685 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 NCBP2-AS2Q69YL0 99 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ADNP2Q6IQ32 1131 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 OLFML1Q6UWY5 402 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 QSOX2Q6ZRP7 698 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 PHC3Q8NDX5 983 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 SGCDQ92629 289 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 LRRC58Q96CX6 371 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 GALPQ9UBC7 116 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 CHP2O43745 196 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 GATBO75879 557 aaKnown RBP10.71□□□□□ -0.7
VAPB-204ENST00000475243 DIRAS1O95057 198 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 CD2P06729 351 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 RAP2AP10114 183 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ATP1B2P14415 290 aaPredicted RBP10.71□□□□□ -0.7
VAPB-204ENST00000475243 ZNF20P17024 532 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 OGNP20774 298 aaKnown RBP10.71□□□□□ -0.7
VAPB-204ENST00000475243 KCNJ5P48544 419 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 TAS2R50P59544 299 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 RFTN1Q14699 578 aaPredicted RBP10.71□□□□□ -0.7
VAPB-204ENST00000475243 TNFAIP8L3Q5GJ75 292 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 SPATC1Q76KD6 591 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ADAD1Q96M93 576 aaKnown RBP10.71□□□□□ -0.7
VAPB-204ENST00000475243 FZD8Q9H461 694 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 TMEM63AO94886 807 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ARFRP1Q13795 201 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 TEAD2Q15562 447 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 OR4F3Q6IEY1 312 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 CLDN19Q8N6F1 224 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 TMEM209Q96SK2 561 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ZNF224Q9NZL3 707 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 ZDHHC2Q9UIJ5 367 aa10.71□□□□□ -0.7
VAPB-204ENST00000475243 CA12O43570 354 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 HLA-EP13747 358 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 OR3A3P47888 321 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 OR3A2P47893 321 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 PTPRCAPQ14761 206 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TYSND1Q2T9J0 566 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 LRRTM4Q86VH4 590 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 LMX1AQ8TE12 382 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 THEM6Q8WUY1 208 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TTYH2Q9BSA4 534 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GRHL1Q9NZI5 618 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 RPL26L1Q9UNX3 145 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 HYKKA2RU49 373 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 EI24O14681 340 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 MTTPP55157 894 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 ERVK-8P63133 956 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 PDGFRLQ15198 375 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TIGD6Q17RP2 521 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 MBOAT1Q6ZNC8 495 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 METTL27Q8N6F8 245 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 ZNF676Q8N7Q3 588 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GLB1L3Q8NCI6 653 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 ST6GALNAC4Q9H4F1 302 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 SPIN1Q9Y657 262 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 LOC100509620A0A075B734 347 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 C2orf92A0A1B0GVN3 265 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GLOD5A6NK44 160 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 ARVCFO00192 962 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 PRDX6P30041 224 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 GBX2P52951 348 aaPredicted RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 KLHL22Q53GT1 634 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 C1orf52Q8N6N3 182 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 ANKFN1Q8N957 763 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 TFB2MQ9H5Q4 396 aaKnown RBP10.7□□□□□ -0.7
VAPB-204ENST00000475243 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 EBF2Q9HAK2 575 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 P2RX2Q9UBL9 471 aa10.7□□□□□ -0.7
VAPB-204ENST00000475243 RPLP0P05388 317 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms