RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 DKK4Q9UBT3 224 aa13.55□□□□□ -0.24
FRMD4A-204ENST00000475141 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
FRMD4A-204ENST00000475141 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
FRMD4A-204ENST00000475141 HMGB1P1B2RPK0 211 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 E7ENX8 843 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 RASSF9O75901 435 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 CCNDBP1O95273 360 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 PRB1P04280 392 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 MYL2P10916 166 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 OAS2P29728 719 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 KCNC1P48547 511 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 ALDH18A1P54886 795 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 TAP2Q03519 686 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 FASTKQ14296 549 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 NAA25Q14CX7 972 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 PFKFB4Q16877 469 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 HSP90B2PQ58FF3 399 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 PRAMEF13Q5VWM6 474 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 SUSD1Q6UWL2 747 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 OR4D9Q8NGE8 314 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 RDH11Q8TC12 318 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 TCP10LQ8TDR4 215 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 CCDC126Q96EE4 140 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 NRTNQ99748 197 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 NUDT22Q9BRQ3 303 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 POMT2Q9UKY4 750 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 TNPO3Q9Y5L0 923 aaKnown RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 MN1Q10571 1320 aaPredicted RBP13.54□□□□□ -0.24
FRMD4A-204ENST00000475141 TLCD2A6NGC4 264 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 NTN3O00634 580 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 TM9SF1O15321 606 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PRPF4O43172 522 aaKnown RBP eCLIP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 TYROBPO43914 113 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PLIN3O60664 434 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 WDR47O94967 919 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 ZWINTO95229 277 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 FKBP9O95302 570 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PROCP04070 461 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 MTHFD2P13995 350 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 JUPP14923 745 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 CREB1P16220 341 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 UGT2B7P16662 529 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 CDH3P22223 829 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 ATP5F1P24539 256 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 ITPKBP27987 946 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 GFERP55789 205 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PTCHD3Q3KNS1 767 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SNAP47Q5SQN1 464 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 TMEM71Q6P5X7 295 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SPESP1Q6UW49 350 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 LRRC70Q7Z2Q7 622 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 CARFQ8N187 725 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PTGR2Q8N8N7 351 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 ARMC2Q8NEN0 867 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 OR56A3Q8NH54 315 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 UBTD2Q8WUN7 234 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PHF21BQ96EK2 531 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 FAM111AQ96PZ2 611 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 MIPEPQ99797 713 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 HAUS8Q9BT25 410 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 SPHK1Q9NYA1 384 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 TAC3Q9UHF0 121 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 EMCNQ9ULC0 261 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 DYRK1BQ9Y463 629 aa13.53□□□□□ -0.24
FRMD4A-204ENST00000475141 A0A087WV48 116 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 A0A0J9YY10 115 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 STX16-NPEPL1H3BU86 382 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 STX16O14662 325 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 KLK8O60259 260 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 CCNT2O60583 730 aaKnown RBP13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 STK16O75716 305 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 C9P02748 559 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 CMPK1P30085 196 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 PEBP1P30086 187 aaKnown RBP13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 GGT5P36269 586 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 HSPA7P48741 367 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 ARL4DP49703 201 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 PPP1CAP62136 330 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 NFKB2Q00653 900 aa13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 INSM1Q01101 510 aaPredicted RBP13.52□□□□□ -0.25
FRMD4A-204ENST00000475141 SLC5A12Q1EHB4 618 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms