RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZFATQ9P243 1243 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 DHCR7Q9UBM7 475 aaKnown RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 PCDHGB7Q9Y5F8 929 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 ESYT3A0FGR9 886 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 E7ESA3 106 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TP73O15350 636 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 VPS26AO75436 327 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 SLCO2B1O94956 709 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 PDGFAP04085 211 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 CBSLP0DN79 551 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 CBSP35520 551 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 MGAT5Q09328 741 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 CUL1Q13616 776 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TSTA3Q13630 321 aaPredicted RBP14.53□□□□□ -0.08
VARS-223ENST00000474643 ZIC1Q15915 447 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 NADK2Q4G0N4 442 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 NKAIN1Q4KMZ8 207 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TEDDM1Q5T9Z0 273 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 STEAP4Q687X5 459 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 UGT3A1Q6NUS8 523 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TRMT10BQ6PF06 316 aaKnown RBP14.53□□□□□ -0.08
VARS-223ENST00000474643 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TTLL10Q6ZVT0 673 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 FAM20CQ8IXL6 584 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 FAM26EQ8N5C1 309 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 FDCSPQ8NFU4 85 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 FBXO25Q8TCJ0 367 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 ADAMTS17Q8TE56 1095 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 RAD51AP1Q96B01 352 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 IL17FQ96PD4 163 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 MFRPQ9BY79 579 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 SLC29A3Q9BZD2 475 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 EURLQ9NYK6 297 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 TRMT6Q9UJA5 497 aaKnown RBP14.53□□□□□ -0.08
VARS-223ENST00000474643 CDYLQ9Y232 598 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 KLHL20Q9Y2M5 609 aa14.53□□□□□ -0.08
VARS-223ENST00000474643 RASGRF2O14827 1237 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 CCNFP41002 786 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 SSPNQ14714 243 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 TRADDQ15628 312 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 ZNF549Q6P9A3 640 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 CEP128Q6ZU80 1094 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 MRGPREQ86SM8 312 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 MCATQ8IVS2 390 aaKnown RBP14.52□□□□□ -0.09
VARS-223ENST00000474643 IFT20Q8IY31 132 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 GPATCH11Q8N954 259 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 OR2L8Q8NGY9 312 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 TM9SF4Q92544 642 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 CDKL2Q92772 493 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 KCNJ9Q92806 393 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 NDNQ99608 321 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 GPR21Q99679 349 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 SELENOSQ9BQE4 189 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 WDR83Q9BRX9 315 aaKnown RBP14.52□□□□□ -0.09
VARS-223ENST00000474643 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.09
VARS-223ENST00000474643 CHRNA10Q9GZZ6 450 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 LUZP4Q9P127 313 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 TXNDC16Q9P2K2 825 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 ANKMY1Q9P2S6 941 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 GALPQ9UBC7 116 aa14.52□□□□□ -0.09
VARS-223ENST00000474643 MTRF1LQ9UGC7 380 aaKnown RBP14.52□□□□□ -0.09
VARS-223ENST00000474643 SPENQ96T58 3664 aaKnown RBP14.52□□□□□ -0.09
VARS-223ENST00000474643 ANKRD12Q6UB98 2062 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 A0A1B0GX78 115 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 AGFG2O95081 481 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 AHSGP02765 367 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 CAPN1P07384 714 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 MCM3P25205 808 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 VARSP26640 1264 aaKnown RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 TNFRSF8P28908 595 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 PEBP1P30086 187 aaKnown RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 BDKRB1P46663 353 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 GRM7Q14831 915 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 KLHL38Q2WGJ6 581 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 ACSBG2Q5FVE4 666 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 TCTE1Q5JU00 501 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 VWA5B1Q5TIE3 1220 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 FIGLAQ6QHK4 219 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 CNTN4Q8IWV2 1026 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 OR2Y1Q8NGV0 311 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 IFT81Q8WYA0 676 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 INPP5DQ92835 1189 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 PTERQ96BW5 349 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 VPS50Q96JG6 964 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 GBP5Q96PP8 586 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 NUDT9Q9BW91 350 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 ILKAPQ9H0C8 392 aaPredicted RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 LRRC4CQ9HCJ2 640 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 NSMCE4AQ9NXX6 385 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 TAS2R13Q9NYV9 303 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 DMGDHQ9UI17 866 aaKnown RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 RUVBL2Q9Y230 463 aaKnown RBP14.51□□□□□ -0.09
VARS-223ENST00000474643 NFS1Q9Y697 457 aa14.51□□□□□ -0.09
VARS-223ENST00000474643 COL12A1Q99715 3063 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 NBASA2RRP1 2371 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 HCRTR1O43613 425 aa14.5□□□□□ -0.09
VARS-223ENST00000474643 IPO13O94829 963 aaKnown RBP14.5□□□□□ -0.09
VARS-223ENST00000474643 CATP04040 527 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms