RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 BCAS2O75934 225 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 B3GALT4O96024 378 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SLC35G4P0C7Q5 338 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 AMD1P17707 334 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SDC1P18827 310 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 CCR3P51677 355 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 FAM174BQ3ZCQ3 159 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 PYCR3Q53H96 274 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SPANXN4Q5MJ08 99 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 CACHD1Q5VU97 1274 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 LRRC74BQ6ZQY2 392 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 MINDY1Q8N5J2 469 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 OR7G3Q8NG95 312 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 JADE3Q92613 823 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 CMTM7Q96FZ5 175 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 INSM2Q96T92 566 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 MENTQ9BUN1 341 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 DPY30Q9C005 99 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 ITM2CQ9NQX7 267 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 ASIC5Q9NY37 505 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 ABCD2Q9UBJ2 740 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 PNMA8BQ9ULN7 279 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 HEATR5BQ9P2D3 2071 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 H0YIV9 168 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 FKBP6O75344 327 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 LRATO95237 230 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 PSMB5P28074 263 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SMU1Q2TAY7 513 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 THEMIS2Q5TEJ8 643 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 Q7L0L9 218 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 GALNT13Q8IUC8 556 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.4■□□□□ 0.38
VARS2-206ENST00000473916 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 HUS1BQ8NHY5 278 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 GFM2Q969S9 779 aaKnown RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 TMEM125Q96AQ2 219 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 RAD51AP1Q96B01 352 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 ASB9Q96DX5 294 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 PDXPQ96GD0 296 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 C1QTNF7Q9BXJ2 289 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 CCDC177Q9NQR7 707 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 GEMIN8Q9NWZ8 242 aaKnown RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 STOML1Q9UBI4 398 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 SUCOQ9UBS9 1254 aaKnown RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 USP22Q9UPT9 525 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 C15orf41Q9Y2V0 281 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 NEUROG3Q9Y4Z2 214 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 PCDHA9Q9Y5H5 950 aa17.4■□□□□ 0.38
VARS2-206ENST00000473916 DNMT3AQ9Y6K1 912 aaPredicted RBP17.4■□□□□ 0.38
VARS2-206ENST00000473916 NUP214P35658 2090 aaPredicted RBP17.39■□□□□ 0.38
VARS2-206ENST00000473916 COL6A3P12111 3177 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 OR52A4PA6NMU1 304 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 GPR89AB7ZAQ6 455 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 GPR89BP0CG08 455 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 KELP23276 732 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 PRPH2P23942 346 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 SOX11P35716 441 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 HNF4AP41235 474 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 PCDH1Q08174 1060 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 TRIM25Q14258 630 aaKnown RBP17.39■□□□□ 0.37
VARS2-206ENST00000473916 SLBPQ14493 270 aaKnown RBP eCLIP17.39■□□□□ 0.37
VARS2-206ENST00000473916 CLCA4Q14CN2 919 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 SAMD4BQ5PRF9 694 aaKnown RBP17.39■□□□□ 0.37
VARS2-206ENST00000473916 CAPRIN2Q6IMN6 1127 aaKnown RBP17.39■□□□□ 0.37
VARS2-206ENST00000473916 AAGABQ6PD74 315 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 DLEU7Q6UYE1 221 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 CYP2R1Q6VVX0 501 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 C12orf66Q96MD2 445 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 CLMPQ9H6B4 373 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 SPATA6Q9NWH7 488 aaPredicted RBP17.39■□□□□ 0.37
VARS2-206ENST00000473916 GID8Q9NWU2 228 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 DYRK1BQ9Y463 629 aa17.39■□□□□ 0.37
VARS2-206ENST00000473916 CACNB4O00305 520 aaPredicted RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 SRFP11831 508 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PHC1P78364 1004 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 DMPKQ09013 629 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 E2F2Q14209 437 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 FBXO43Q4G163 708 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRAMEF14Q5SWL7 426 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRAMEF13Q5VWM6 474 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 DHDDSQ86SQ9 333 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 OR1E3Q8WZA6 343 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 BMFQ96LC9 184 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PPM1MQ96MI6 270 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 HOPXQ9BPY8 73 aaPredicted RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRDM8Q9NQV8 689 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 IMP3Q9NV31 184 aaKnown RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 NMRK1Q9NWW6 199 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 GPRC5BQ9NZH0 403 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PPT2Q9UMR5 302 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PLXND1Q9Y4D7 1925 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 SERTM1A2A2V5 107 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRR19A6NJB7 356 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 C7P10643 843 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 CDH1P12830 882 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 CSTF3Q12996 717 aaKnown RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 SELPLGQ14242 412 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms