RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RASGRF2O14827 1237 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 MAN1A2O60476 641 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 SLC19A2O60779 497 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 USP1O94782 785 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 RASAL1O95294 804 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 S1PR4O95977 384 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 GOT2P00505 430 aaKnown RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 OR56A5P0C7T3 313 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 AOAHP28039 575 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 CARSP49589 748 aaKnown RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 EMP2P54851 167 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 OCA2Q04671 838 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 HKDC1Q2TB90 917 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 PRTGQ2VWP7 1150 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 FAM214AQ32MH5 1076 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 TCTE1Q5JU00 501 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 CCDC181Q5TID7 509 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 YOD1Q5VVQ6 348 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 ARHGEF39Q8N4T4 335 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 TTC29Q8NA56 475 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 OR2L3Q8NG85 312 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 OR52K1Q8NGK4 314 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 MARCH4Q9P2E8 410 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 SUCOQ9UBS9 1254 aaKnown RBP11.99□□□□□ -0.49
TRAF4-209ENST00000473421 INTUQ9ULD6 942 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 DUSP10Q9Y6W6 482 aa11.99□□□□□ -0.49
TRAF4-209ENST00000473421 IGKV1-8A0A0C4DH67 115 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 A0A1W2PQ72 361 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 TCRBV7S2A1N4TA0A589 114 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 H0YGG7 62 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 FOXS1O43638 330 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 SRPX2O60687 465 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 SLCO2B1O94956 709 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 BMP10O95393 424 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 STATHP02808 62 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 FBLP22087 321 aaKnown RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 MAGEA1P43355 309 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 ARF3P61204 181 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 TPM4P67936 248 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 MAT1AQ00266 395 aaKnown RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 PARP6Q2NL67 630 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 CNSTQ6PJW8 725 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 XKRXQ6PP77 449 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 C3P1Q6ZMU1 363 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 DCUN1D3Q8IWE4 304 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 CHERPQ8IWX8 916 aaKnown RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 ZUFSPQ96AP4 578 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 IMMP1LQ96LU5 166 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 SIGLEC12Q96PQ1 595 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 NPAS2Q99743 824 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 TMEM121Q9BTD3 319 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 ACAT2Q9BWD1 397 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 YIPF2Q9BWQ6 316 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 ZNHIT6Q9NWK9 470 aaKnown RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 STMN3Q9NZ72 180 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 TRPC4Q9UBN4 977 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 FEZ2Q9UHY8 353 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
TRAF4-209ENST00000473421 ZNF835Q9Y2P0 537 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 PCDHA3Q9Y5H8 950 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 GTF3C1Q12789 2109 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 SCN2AQ99250 2005 aa11.98□□□□□ -0.49
TRAF4-209ENST00000473421 LOC102723996A0A087X1L8 192 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 OR2A25A4D2G3 310 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 OR5H15A6NDH6 313 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 TARM1B6A8C7 271 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 PRAMEF2O60811 474 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 WFS1O76024 890 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 C1orf105O95561 183 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 CTNNA1P35221 906 aaKnown RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 HSF1Q00613 529 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 INAQ16352 499 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 C11orf63Q6NUN7 778 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 UNC5DQ6UXZ4 953 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 RPTNQ6XPR3 784 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 SPNS3Q6ZMD2 512 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 PRUNE1Q86TP1 453 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 VSTM4Q8IW00 320 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 ZC3H7AQ8IWR0 971 aaKnown RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 SLC22A18Q96BI1 424 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 MTFMTQ96DP5 389 aaKnown RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 DPH7Q9BTV6 452 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 ZNF700Q9H0M5 742 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 ANKRD10Q9NXR5 420 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 IL1RAPL1Q9NZN1 696 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 TTC7AQ9ULT0 858 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 RUVBL1Q9Y265 456 aaKnown RBP11.97□□□□□ -0.49
TRAF4-209ENST00000473421 NEU2Q9Y3R4 380 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 KLK4Q9Y5K2 254 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 SPG11Q96JI7 2443 aa11.97□□□□□ -0.49
TRAF4-209ENST00000473421 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 A0A0A6YYC8 382 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-209ENST00000473421 A8MUI8 341 aa11.96□□□□□ -0.49
TRAF4-209ENST00000473421 FAM227AF5H4B4 570 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms