RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GABARAPL1Q9H0R8 117 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 POLE4Q9NR33 117 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 PCDH10Q9P2E7 1040 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 SAMD4AQ9UPU9 718 aaKnown RBP20.53■□□□□ 0.88
COL18A1-207ENST00000473212 PRAMEF4O60810 478 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 CLDN9O95484 217 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 HOXB9P17482 250 aaPredicted RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 ST13P50502 369 aaKnown RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 ARHGDIAP52565 204 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 KEAP1Q14145 624 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 HIST2H2ACQ16777 129 aaPredicted RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 PRAMEF9Q5VWM5 478 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 LINC00299Q6ZSB3 139 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 DSG4Q86SJ6 1040 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 TTC29Q8NA56 475 aaPredicted RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 DNAJB8Q8NHS0 232 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 ADAMTS19Q8TE59 1207 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 UBTD2Q8WUN7 234 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 RASSF1Q9NS23 344 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 PDP1Q9P0J1 537 aaPredicted RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 LRFN2Q9ULH4 789 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 PNMA8BQ9ULN7 279 aaPredicted RBP20.52■□□□□ 0.88
COL18A1-207ENST00000473212 ERVK-11Q9UQG0 969 aa20.52■□□□□ 0.88
COL18A1-207ENST00000473212 GLYATL1P3A0A0U1RQE8 302 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 NPIPB15A6NHN6 443 aaPredicted RBP20.52■□□□□ 0.87
COL18A1-207ENST00000473212 H7C4K7 107 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 RGS10O43665 173 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 KDM1AO60341 852 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 FAM20BO75063 409 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 CCNDBP1O95273 360 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 TRBC1P01850 177 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 KRT6AP02538 564 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 KRT6BP04259 564 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 KRT6CP48668 564 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 CDH18Q13634 790 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 CDKN3Q16667 212 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 SELENOMQ8WWX9 145 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 HPS1Q92902 700 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 APIPQ96GX9 242 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 PSD2Q9BQI7 771 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 EBPLQ9BY08 206 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 IL1RAPQ9NPH3 570 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 ACOT13Q9NPJ3 140 aa20.52■□□□□ 0.87
COL18A1-207ENST00000473212 SCN8AQ9UQD0 1980 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 RFXANKO14593 260 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 CA12O43570 354 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 ITGALP20701 1170 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 PAGE2Q7Z2X7 111 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 VTCN1Q7Z7D3 282 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 TMEM150AQ86TG1 271 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 MINDY2Q8NBR6 621 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 CDK5RAP1Q96SZ6 601 aaKnown RBP20.51■□□□□ 0.87
COL18A1-207ENST00000473212 APOL4Q9BPW4 351 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 CLSTN3Q9BQT9 956 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 TM9SF3Q9HD45 589 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 A0A1W2PQ67 120 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 ALOX5P09917 674 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 HOXA9P31269 272 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 CXCR4P61073 352 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 CATSPEREQ5SY80 951 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 TXNDC8Q6A555 127 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 OR4F3Q6IEY1 312 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 SLC8B1Q6J4K2 584 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 ZCCHC8Q6NZY4 707 aaKnown RBP20.51■□□□□ 0.87
COL18A1-207ENST00000473212 PLEKHG7Q6ZR37 379 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 VRK3Q8IV63 474 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 PHF10Q8WUB8 498 aaKnown RBP20.51■□□□□ 0.87
COL18A1-207ENST00000473212 SKA2Q8WVK7 121 aaPredicted RBP20.51■□□□□ 0.87
COL18A1-207ENST00000473212 SLC35B4Q969S0 331 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 SLC29A3Q9BZD2 475 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 AASDHPPTQ9NRN7 309 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 ARL15Q9NXU5 204 aa20.51■□□□□ 0.87
COL18A1-207ENST00000473212 MYOFQ9NZM1 2061 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 A0A1W2PQ45 241 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 A0A1W2PQY0 241 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 TTC34A8MYJ7 566 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 VLDLRP98155 873 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 B4GALNT1Q00973 533 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 TAF12Q16514 161 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 INO80DQ53TQ3 878 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 AGAP7PQ5VUJ5 663 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 BEND7Q8N7W2 519 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 ARL14EPQ8N8R7 260 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 LGALS12Q96DT0 336 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 DPH2Q9BQC3 489 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 HSPE1-MOB4S4R3N1 261 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 LCKP06239 509 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 HOXB6P17509 224 aaKnown RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 SDC1P18827 310 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 DNAJA1P31689 397 aaKnown RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 CCR7P32248 378 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 MAD2L1BPQ15013 274 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 APOLD1Q96LR9 279 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 SLIRPQ9GZT3 109 aaKnown RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 FAM8A1Q9UBU6 413 aa20.5■□□□□ 0.87
COL18A1-207ENST00000473212 NDRG4Q9ULP0 352 aaKnown RBP20.5■□□□□ 0.87
COL18A1-207ENST00000473212 SH3BGRLO75368 114 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 MTX2O75431 263 aa20.49■□□□□ 0.87
COL18A1-207ENST00000473212 KRT20P35900 424 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms