RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ERAL1O75616 437 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 KRT33AO76009 404 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 POP4O95707 220 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 PTMAP06454 111 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 HAPLN1P10915 354 aaPredicted RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 PRG2P13727 222 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 MTHFRP42898 656 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 MATR3P43243 847 aaKnown RBP eCLIP3.67□□□□□ -1.825e-7■■■■■ 27
CD46-213ENST00000471987 IRX4P78413 519 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 FCHO2Q0JRZ9 810 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 PHKG1Q16816 387 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 IGSF11Q5DX21 431 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 CDHR3Q6ZTQ4 885 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 CHMP1BQ7LBR1 199 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 ARHGAP22Q7Z5H3 698 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 KBTBD6Q86V97 674 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 SLC25A42Q86VD7 318 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 GUF1Q8N442 669 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 THAP8Q8NA92 274 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 TDRD5Q8NAT2 981 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 C9orf43Q8TAL5 461 aaPredicted RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 THOC1Q96FV9 657 aaKnown RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 C1orf147Q96MC9 270 aaPredicted RBP3.67□□□□□ -1.82
CD46-213ENST00000471987 OPA3Q9H6K4 179 aa3.67□□□□□ -1.82
CD46-213ENST00000471987 A0A087WUV0 522 aaPredicted RBP3.66□□□□□ -1.82
CD46-213ENST00000471987 GPR75-ASB3A0A0A6YYF3 556 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 SNURFLB1AK76 121 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 GPRIN2O60269 458 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 BCL10O95999 233 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 DANCRP0C864 163 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 GP1BBP13224 206 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 GP9P14770 177 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 ALDH3A2P51648 485 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 MYL7Q01449 175 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 CD300CQ08708 224 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 C15orf59Q2T9L4 293 aaPredicted RBP3.66□□□□□ -1.82
CD46-213ENST00000471987 TMEM211Q6ICI0 200 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 LCLAT1Q6UWP7 414 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 FAM131BQ86XD5 332 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 MMD2Q8IY49 270 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 LGI2Q8N0V4 545 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 POC5Q8NA72 575 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 PIGBQ92521 554 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 LPGAT1Q92604 370 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 SYN2Q92777 582 aaPredicted RBP3.66□□□□□ -1.82
CD46-213ENST00000471987 SPDL1Q96EA4 605 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 CNRIP1Q96F85 164 aaPredicted RBP3.66□□□□□ -1.82
CD46-213ENST00000471987 MAP3K3Q99759 626 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 ZNF577Q9BSK1 485 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
CD46-213ENST00000471987 PADI2Q9Y2J8 665 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 TMED3Q9Y3Q3 217 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 R4GN57 208 aa3.66□□□□□ -1.82
CD46-213ENST00000471987 IGHV4-30-2A0A087WSY4 118 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 LOC102723996A0A087X1L8 192 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 A0A1W2PQ09 198 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 CCDC189A1A4V9 331 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 SHISA7A6NL88 538 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 ADAMDEC1O15204 470 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 IGHV2-70P01814 119 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 SOX3P41225 446 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 NRIP1P48552 1158 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 EXT1Q16394 746 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 MS4A18Q3C1V0 323 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 RNF212Q495C1 297 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 KCNMB4Q86W47 210 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 OR7A2PQ8NGA2 310 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 SPACA9Q96E40 222 aaPredicted RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 FAM120BQ96EK7 910 aaKnown RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 PARLQ9H300 379 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 TLE6Q9H808 572 aa3.65□□□□□ -1.83
CD46-213ENST00000471987 FBXO2Q9UK22 296 aaPredicted RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 ZNF215Q9UL58 517 aaPredicted RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 PTRH2Q9Y3E5 179 aaKnown RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 ZNF646O15015 1829 aaPredicted RBP3.65□□□□□ -1.83
CD46-213ENST00000471987 FPGTO14772 594 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 IPO8O15397 1037 aaKnown RBP3.64□□□□□ -1.83
CD46-213ENST00000471987 TOMM70O94826 608 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 MELTFP08582 738 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 BCL3P20749 454 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 TNFAIP3P21580 790 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 ETV5P41161 510 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 DNA2P51530 1060 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 DDX10Q13206 875 aaKnown RBP3.64□□□□□ -1.83
CD46-213ENST00000471987 SGCGQ13326 291 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 PTPN14Q15678 1187 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 DUSP28Q4G0W2 176 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 PHC2Q8IXK0 858 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 NDUFAF2Q8N183 169 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 KLHDC1Q8N7A1 406 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 MPP4Q96JB8 637 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 TIGD1Q96MW7 591 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 SEPHS2Q99611 448 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 CHCHD5Q9BSY4 110 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 UBA5Q9GZZ9 404 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 TERF2IPQ9NYB0 399 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 GTSE1Q9NYZ3 720 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 LNPEPQ9UIQ6 1025 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 TSPAN16Q9UKR8 245 aa3.64□□□□□ -1.83
CD46-213ENST00000471987 ABT1Q9ULW3 272 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms