RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 MYLK3Q32MK0 819 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 KCNC2Q96PR1 638 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ZDHHC4Q9NPG8 344 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 MYH10P35580 1976 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ACOX3O15254 700 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ADNP2Q6IQ32 1131 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ZNF783Q6ZMS7 281 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 RIOK2Q9BVS4 552 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 FBRSL1Q9HCM7 1045 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 TLR4O00206 839 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 SCN2BO60939 215 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 CLDN7O95471 211 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCCB-210ENST00000471595 ARSFP54793 590 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 RING1Q06587 406 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 UPP1Q16831 310 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 SPANXN4Q5MJ08 99 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 RPS27LQ71UM5 84 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 HDAC2Q92769 488 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 SNTG1Q9NSN8 517 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 CLDN4O14493 209 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 HTR1EP28566 365 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 IRAK1BP1Q5VVH5 260 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 RGL4Q8IZJ4 473 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 OR14C36Q8NHC7 312 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 HAPLN2Q9GZV7 340 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 TOR3AQ9H497 397 aa12.64□□□□□ -0.39
PCCB-210ENST00000471595 FARSBQ9NSD9 589 aaKnown RBP12.64□□□□□ -0.39
PCCB-210ENST00000471595 REM1O75628 298 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 HPRP00739 348 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 HMGN1P05114 100 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 STARP49675 285 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 GANABQ14697 944 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 SUZ12Q15022 739 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 C6orf136Q5SQH8 315 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 C14orf80Q86SX3 495 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 RGMAQ96B86 450 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 FBXL20Q96IG2 436 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 TUBA1CQ9BQE3 449 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ADAMTS10Q9H324 1103 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 XKRYO14609 159 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 DENRO43583 198 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 DNAJB5O75953 348 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 CLPXO76031 633 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 SNX4O95219 450 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ITPKBP27987 946 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 MPIP34949 423 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 C1QTNF8P60827 252 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 PIGUQ9H490 435 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 MRPS30Q9NP92 439 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 EVA1BQ9NVM1 165 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 IKZF2Q9UKS7 526 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 TMA7Q9Y2S6 64 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 MTMR11A4FU01 709 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ARVCFO00192 962 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 RASAL1O95294 804 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 MYH7P12883 1935 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 NCBP2P52298 156 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCCB-210ENST00000471595 PLA2G16P53816 162 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ZNF630Q2M218 657 aaPredicted RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 NANOGP8Q6NSW7 305 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 NAPRTQ6XQN6 538 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 GET4Q7L5D6 327 aaPredicted RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 GRPEL2Q8TAA5 225 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 NANOGQ9H9S0 305 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 CCDC59Q9P031 241 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 RNF11Q9Y3C5 154 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 AGR2O95994 175 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ATG9BQ674R7 924 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 MINDY1Q8N5J2 469 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 KLHL6Q8WZ60 621 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 HSH2DQ96JZ2 352 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ART5Q96L15 291 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 ZNF354BQ96LW1 612 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 SMURF2Q9HAU4 748 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 B3GALT2O43825 422 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 INHAP05111 366 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
PCCB-210ENST00000471595 IL7RP16871 459 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 TPTEP56180 551 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 CDK6Q00534 326 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
PCCB-210ENST00000471595 OGFRL1Q5TC84 451 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms