RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 C12orf65Q9H3J6 166 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 PFDN4Q9NQP4 134 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TRNAU1APQ9NX07 287 aaKnown RBP6.46□□□□□ -1.38
VAMP3-202ENST00000470357 GALPQ9UBC7 116 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 KLQ9UEF7 1012 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 CDYLQ9Y232 598 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TMEM98Q9Y2Y6 226 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 PCDHGA5Q9Y5G8 931 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 HEBP2Q9Y5Z4 205 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 DGKBQ9Y6T7 804 aa6.46□□□□□ -1.38
VAMP3-202ENST00000470357 TDRD6O60522 2096 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ARHGEF17Q96PE2 2063 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SPTY2D1-AS1A0A0U1RR47 76 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 TMEM8BA6NDV4 472 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 UBXN8O00124 270 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SNNO75324 88 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 KATNA1O75449 491 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PSIP1O75475 530 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RASGRP1O95267 797 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RECKO95980 971 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 TNFP01375 233 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SBK3P0C264 359 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SLC2A4P14672 509 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 NDUFS1P28331 727 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CD38P28907 300 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PBLDP30039 288 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 HSD17B2P37059 387 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 HALP42357 657 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SLC1A6P48664 564 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 NOVA1P51513 510 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PGGT1BP53609 377 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 NAGLUP54802 743 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SRP54P61011 504 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RPS26P62854 115 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RACK1P63244 317 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 OCRLQ01968 901 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PRKAA1Q13131 559 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PCBP2Q15366 365 aaKnown RBP eCLIP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PPP1R3AQ16821 1122 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PFKFB4Q16877 469 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF658BQ4V348 819 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PYCR3Q53H96 274 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF648Q5T619 568 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 OGFOD3Q6PK18 319 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ENPP7Q6UWV6 458 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 WASH2PQ6VEQ5 465 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CYHR1Q6ZMK1 362 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 GCNT7Q6ZNI0 430 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 Q6ZSR6 202 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CEP68Q76N32 757 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 LPCAT2Q7L5N7 544 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 EFL1Q7Z2Z2 1120 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RABEPKQ7Z6M1 372 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 C11orf96Q7Z7L8 435 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RASGRP3Q8IV61 690 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 LRRC34Q8IZ02 419 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ABCA7Q8IZY2 2146 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SDR16C5Q8N3Y7 309 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CCNYL1Q8N7R7 359 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PTGR2Q8N8N7 351 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 AVL9Q8NBF6 648 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 OR6Y1Q8NGX8 325 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PIWIL2Q8TC59 973 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 UBTD2Q8WUN7 234 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RLN3Q8WXF3 142 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 DNASE2BQ8WZ79 361 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 EXT2Q93063 718 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RAD51AP1Q96B01 352 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CCDC138Q96M89 665 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 EGFL8Q99944 293 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 MYOCQ99972 504 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SCNM1Q9BWG6 230 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 GATA5Q9BWX5 397 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RAB11FIP5Q9BXF6 653 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 STN1Q9H668 368 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
VAMP3-202ENST00000470357 FZD3Q9NPG1 666 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 CD93Q9NPY3 652 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 WASH6PQ9NQA3 447 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 AASDHPPTQ9NRN7 309 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 FGFR1OP2Q9NVK5 253 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 ARL15Q9NXU5 204 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 WWOXQ9NZC7 414 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SUSD2Q9UGT4 822 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 POLG2Q9UHN1 485 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 MOSPD1Q9UJG1 213 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 SUFUQ9UMX1 484 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 RAP2CQ9Y3L5 183 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 GON4LQ3T8J9 2241 aa6.45□□□□□ -1.38
VAMP3-202ENST00000470357 PI4KAP42356 2102 aa6.44□□□□□ -1.38
VAMP3-202ENST00000470357 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
VAMP3-202ENST00000470357 TNRC6BQ9UPQ9 1833 aaKnown RBP6.44□□□□□ -1.38
VAMP3-202ENST00000470357 TMEM202A6NGA9 273 aa6.44□□□□□ -1.38
VAMP3-202ENST00000470357 OR5K4A6NMS3 321 aa6.44□□□□□ -1.38
VAMP3-202ENST00000470357 C4orf47A7E2U8 309 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms