RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TP53TG5Q9Y2B4 290 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 TNRC6AQ8NDV7 1962 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 UBR5O95071 2799 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 IGKV1-8A0A0C4DH67 115 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 A0A1B0GX78 115 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF839A8K0R7 811 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 E7ENX8 843 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 E7ESA3 106 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 K7EM74 188 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 DSCR3O14972 297 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 SRPX2O60687 465 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 DNAJB5O75953 348 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 AHSGP02765 367 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 CD63P08962 238 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 CMPK1P30085 196 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 TAP2Q03519 686 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 GRM7Q14831 915 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 TEDDM1Q5T9Z0 273 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 LRRC8EQ6NSJ5 796 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 SUSD1Q6UWL2 747 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 PIWIL4Q7Z3Z4 852 aaKnown RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 PTRH1Q86Y79 214 aaKnown RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 OR2Y1Q8NGV0 311 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 FKBP10Q96AY3 582 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 NDNQ99608 321 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 SELENOSQ9BQE4 189 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 DPH7Q9BTV6 452 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 ZC3H7BQ9UGR2 993 aaKnown RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 CHMP2BQ9UQN3 213 aa13.47□□□□□ -0.25
COMMD3-208ENST00000470045 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD3-208ENST00000470045 ARGFXA6NJG6 315 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 EFCAB8A8MWE9 144 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 CEACAM4O75871 244 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 NR1D1P20393 614 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 MCM3P25205 808 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 IMPA1P29218 277 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 CDKN2DP55273 166 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ARL4CP56559 192 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ICE2Q659A1 982 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 FRMPD2BQ6IN97 320 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF425Q6IV72 752 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 UGT3A1Q6NUS8 523 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
COMMD3-208ENST00000470045 TTLL10Q6ZVT0 673 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ZFYVE21Q9BQ24 234 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ACAT2Q9BWD1 397 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 ING2Q9H160 280 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 SLC26A1Q9H2B4 701 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 TAS2R13Q9NYV9 303 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 SLC17A6Q9P2U8 582 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 TAC3Q9UHF0 121 aa13.46□□□□□ -0.25
COMMD3-208ENST00000470045 TRMT6Q9UJA5 497 aaKnown RBP13.46□□□□□ -0.25
COMMD3-208ENST00000470045 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
COMMD3-208ENST00000470045 MYO18BQ8IUG5 2567 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 LOC105369274A0A096LPK9 316 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 LOC102723532A0A0G2JNH3 316 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 ZBTB14O43829 449 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 TSPAN12O95859 305 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 PDGFAP04085 211 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 RPA3P35244 121 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 CASRP41180 1078 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 FOLR3P41439 243 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 CARSP49589 748 aaKnown RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 RGS4P49798 205 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 RELAQ04206 551 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 CHAF1BQ13112 559 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 SP140Q13342 867 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 SSPNQ14714 243 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 SLC9A5Q14940 896 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 PRTGQ2VWP7 1150 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 WASHC2DQ5SRD0 308 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 UBE2R2Q712K3 238 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 MED25Q71SY5 747 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 OR4N4Q8N0Y3 316 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 TTC29Q8NA56 475 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-208ENST00000470045 PPFIBP2Q8ND30 876 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 EEF1AKMT1Q8WVE0 214 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 IP6K3Q96PC2 410 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 KRT12Q99456 494 aa13.45□□□□□ -0.26
COMMD3-208ENST00000470045 TRIM31Q9BZY9 425 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms