RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SAT1P21673 171 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 MC4RP32245 332 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 GMPRP36959 345 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 RCN2Q14257 317 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 RPE65Q16518 533 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 MANEAQ5SRI9 462 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 HECTD2Q5U5R9 776 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 XKR5Q6UX68 686 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 PLXDC1Q8IUK5 500 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 NXPE1Q8N323 547 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 OR6P1Q8NGX9 317 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 UTP4Q969X6 686 aaKnown RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 NXNL1Q96CM4 212 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 DCUN1D1Q96GG9 259 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 RILPQ96NA2 401 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 ILKAPQ9H0C8 392 aaPredicted RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 APMAPQ9HDC9 416 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 IMP3Q9NV31 184 aaKnown RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 PNPOQ9NVS9 261 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 NLE1Q9NVX2 485 aaPredicted RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 VWA7Q9Y334 891 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 PCDHB11Q9Y5F2 797 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 PCDHGA3Q9Y5H0 932 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 PIKFYVEQ9Y2I7 2098 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 BAHCC1Q9P281 2608 aa17.08■□□□□ 0.33
MRPL28-208ENST00000469744 B4E171 279 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 STMND1H3BQB6 276 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 CAPN5O15484 640 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 KIF1CO43896 1103 aaKnown RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 LTA4HP09960 611 aaKnown RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 WT1P19544 449 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 ARRB2P32121 409 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 TSPAN7P41732 249 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 SEPHS1P49903 392 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 IDH3AP50213 366 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 PPP1CAP62136 330 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 PRKAA1Q13131 559 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 ZRANB3Q5FWF4 1079 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 WASHC2DQ5SRD0 308 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 METRNLQ641Q3 311 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 KLC3Q6P597 504 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 NAPRTQ6XQN6 538 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 SNX20Q7Z614 316 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 SDCCAG8Q86SQ7 713 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 SNRNP27Q8WVK2 155 aaKnown RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 ZNF514Q96K75 400 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 UBXN10Q96LJ8 280 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 TCF12Q99081 682 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 DDA1Q9BW61 102 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 IGSF5Q9NSI5 407 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 INTS10Q9NVR2 710 aaKnown RBP17.08■□□□□ 0.32
MRPL28-208ENST00000469744 VTI1BQ9UEU0 232 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 TAGLN3Q9UI15 199 aa17.08■□□□□ 0.32
MRPL28-208ENST00000469744 MGAT4DA6NG13 374 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 AGAP14A8MT82 685 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 CD3EAPO15446 510 aaKnown RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 KCNJ13O60928 360 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 C9P02748 559 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 ATP5F1P24539 256 aaPredicted RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 CD82P27701 267 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 CAPZBP47756 277 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 MC2RQ01718 297 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 DLG1Q12959 904 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 ACAP2Q15057 778 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 TYSND1Q2T9J0 566 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 BCL7AQ4VC05 210 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 DCAF12Q5T6F0 453 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 IRGCQ6NXR0 463 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 EPGNQ6UW88 154 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 FAM92BQ6ZTR7 304 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 KIRREL3Q8IZU9 778 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 OR2L2Q8NH16 312 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 COPS8Q99627 209 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 B3GNT4Q9C0J1 378 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 CPSF2Q9P2I0 782 aaKnown RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 XPR1Q9UBH6 696 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 STK38LQ9Y2H1 464 aa17.07■□□□□ 0.32
MRPL28-208ENST00000469744 DNMT3AQ9Y6K1 912 aaPredicted RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 GCN1Q92616 2671 aaKnown RBP17.07■□□□□ 0.32
MRPL28-208ENST00000469744 CCDC162PA2VCL2 907 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-208ENST00000469744 ERVH48-1M5A8F1 160 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 TK2O00142 265 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 DLX3O60479 287 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 C1QL1O75973 258 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 GOT2P00505 430 aaKnown RBP17.06■□□□□ 0.32
MRPL28-208ENST00000469744 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
MRPL28-208ENST00000469744 RAB15P59190 212 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 RHDQ02161 417 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 ZNF789Q5FWF6 425 aa17.06■□□□□ 0.32
MRPL28-208ENST00000469744 TECRLQ5HYJ1 363 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms