RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NAE1Q13564 534 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CHI3L2Q15782 390 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 PTCHD3Q3KNS1 767 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 C14orf28Q4W4Y0 310 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CFAP157Q5JU67 520 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CDKL4Q5MAI5 379 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF678Q5SXM1 525 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CES4AQ5XG92 561 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ZCCHC8Q6NZY4 707 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TMEM53Q6P2H8 277 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 SUSD1Q6UWL2 747 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 C2orf73Q8N5S3 287 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 LINC01555Q8NAE3 123 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ATL1Q8WXF7 558 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 FBXL8Q96CD0 374 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 MED8Q96G25 268 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 EDEM2Q9BV94 578 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ERVK-6Q9BXR3 956 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 STN1Q9H668 368 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF304Q9HCX3 659 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ABCF3Q9NUQ8 709 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 LNPEPQ9UIQ6 1025 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ICKQ9UPZ9 632 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 HCN4Q9Y3Q4 1203 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 PCNX2A6NKB5 2137 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 MDC1Q14676 2089 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 E7ENX8 843 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 SIGLEC6O43699 453 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CCNT2O60583 730 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 STK16O75716 305 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 SUPT7LO94864 414 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 ERGP11308 486 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 IMPDH1P20839 514 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 GGT5P36269 586 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 SLC6A12P48065 614 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 PNLIPRP1P54315 467 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 DNAJB13P59910 316 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TBPL1P62380 186 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TUBA1BP68363 451 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TAP2Q03519 686 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TSTA3Q13630 321 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TMEM26Q6ZUK4 368 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TUBA1AQ71U36 451 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 RAB44Q7Z6P3 723 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 LRRC56Q8IYG6 542 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TCAIMQ8N3R3 496 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 EID2Q8N6I1 236 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CCNYL1Q8N7R7 359 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 OR4E2Q8NGC2 313 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 PPP1R14CQ8TAE6 165 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 LCN9Q8WX39 176 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 APOLD1Q96LR9 279 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 NSUN5Q96P11 429 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 GATA5Q9BWX5 397 aaPredicted RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 TBC1D10AQ9BXI6 508 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 CD244Q9BZW8 370 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 INTS7Q9NVH2 962 aaKnown RBP6.64□□□□□ -1.35
SCAF4-204ENST00000467731 SLC22A14Q9Y267 594 aa6.64□□□□□ -1.35
SCAF4-204ENST00000467731 E2F3O00716 465 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 LRP3O75074 770 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 WDR47O94967 919 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 RPS17P08708 135 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF883P0CG24 379 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 TGM1P22735 817 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PKLRP30613 574 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 MDH1P40925 334 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 CDH13P55290 713 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ARHGAP19Q14CB8 494 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.355e-12■■■□□ 19.2
SCAF4-204ENST00000467731 CSRP2Q16527 193 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PDK4Q16654 411 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ANKS6Q68DC2 871 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 AMIGO1Q86WK6 493 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 RAB42Q8N4Z0 105 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 AVL9Q8NBF6 648 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 OR56A3Q8NH54 315 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ZFPM2Q8WW38 1151 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 CKAP2Q8WWK9 683 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 L3HYPDHQ96EM0 354 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF570Q96NI8 536 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ANKRD27Q96NW4 1050 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PHOX2BQ99453 314 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 C1QTNF3Q9BXJ4 246 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PITPNM3Q9BZ71 974 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 NOP53Q9NZM5 478 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 PCTPQ9UKL6 214 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 BTBD3Q9Y2F9 522 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 TNPO3Q9Y5L0 923 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 CNOT1A5YKK6 2376 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 LY6G6EA0A0G2JKS1 128 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 DPPA5A6NC42 116 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 NUDT21O43809 227 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 GLB1P16278 677 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 TSPAN8P19075 237 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 ARRB2P32121 409 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 CCR10P46092 362 aa6.63□□□□□ -1.35
SCAF4-204ENST00000467731 SUZ12Q15022 739 aaKnown RBP6.63□□□□□ -1.35
SCAF4-204ENST00000467731 CYP2A13Q16696 494 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms