RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GRAPQ13588 217 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TRA2AQ13595 282 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS50-209ENST00000467326 RBM39Q14498 530 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 IL11RAQ14626 422 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 HFEQ30201 348 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 MDH1BQ5I0G3 518 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 RIPPLY2Q5TAB7 128 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 KRT79Q5XKE5 535 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TPGS2Q68CL5 300 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 JADE1Q6IE81 842 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 ISLR2Q6UXK2 745 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TOM1L2Q6ZVM7 507 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 KCTD9Q7L273 389 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 MFN1Q8IWA4 741 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 MAP7D3Q8IWC1 876 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 DRAXINQ8NBI3 349 aaPredicted RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 RBM15BQ8NDT2 890 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 OR7G3Q8NG95 312 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 OR52K1Q8NGK4 314 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 LINGO1Q96FE5 620 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 CEP295NLQ96MC4 621 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 GDAP1L1Q96MZ0 367 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 WDFY2Q96P53 400 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 PGLYRP2Q96PD5 576 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 PLIN2Q99541 437 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 CARD6Q9BX69 1037 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 C1QTNF1Q9BXJ1 281 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 GCOM2Q9BZD3 368 aaPredicted RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 HRH4Q9H3N8 390 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 DENND2DQ9H6A0 471 aaPredicted RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 AKIRIN1Q9H9L7 192 aaPredicted RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 IARS2Q9NSE4 1012 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS50-209ENST00000467326 COPG2Q9UBF2 871 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 DDX25Q9UHL0 483 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 FBXW11Q9UKB1 542 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 FBXW2Q9UKT8 454 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 SNX6Q9UNH7 406 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 TCF19Q9Y242 345 aa3.56□□□□□ -1.84
VPS50-209ENST00000467326 STRAPQ9Y3F4 350 aaKnown RBP3.56□□□□□ -1.84
VPS50-209ENST00000467326 RAD54L2Q9Y4B4 1467 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 NSD2O96028 1365 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 FAM205AQ6ZU69 1335 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 NPHP3Q7Z494 1330 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ZCWPW2A0A1B0GU75 182 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 OR5K3A6NET4 321 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 H3BQ06 376 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 E2F3O00716 465 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 TO15178 435 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 BUB1O43683 1085 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 CYTIPO60759 359 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 DAB1O75553 588 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 IDH1O75874 414 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 KCNK5O95279 499 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 MT-ATP6P00846 226 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 IGHV4-39P01824 125 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 SRPRAP08240 638 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 VIMP08670 466 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 NEFHP12036 1026 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ACTN1P12814 892 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 NCF1P14598 390 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 UGT1A1P22309 533 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 NR2F2P24468 414 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 AHRP35869 848 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 MDH1P40925 334 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 ETV1P50549 477 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PNLIPRP2P54317 469 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 TAS2R40P59535 323 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 HAND2P61296 217 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 ELP6Q0PNE2 266 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 SCGB2A2Q13296 93 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 RRS1Q15050 365 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 TAZQ16635 292 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ZNF789Q5FWF6 425 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ATAD3BQ5T9A4 648 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PLA2G4FQ68DD2 849 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 KRT39Q6A163 491 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 KIAA0930Q6ICG6 404 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 NEK5Q6P3R8 708 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ARHGAP11AQ6P4F7 1023 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 GLDNQ6ZMI3 551 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 C11orf57Q6ZUT1 292 aaPredicted RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 TAS2R42Q7RTR8 314 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 HAUS6Q7Z4H7 955 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 CAMKMTQ7Z624 323 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 UNC5CLQ8IV45 518 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 C4orf19Q8IY42 314 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 TIGD4Q8IY51 512 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 FAM184AQ8NB25 1140 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ITFG2Q969R8 447 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 INTS14Q96SY0 518 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PAFAH2Q99487 392 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PARK7Q99497 189 aaKnown RBP3.55□□□□□ -1.84
VPS50-209ENST00000467326 SSX3Q99909 188 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PKP2Q99959 881 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 ERP44Q9BS26 406 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 CACNG6Q9BXT2 260 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 PDZD7Q9H5P4 517 aa3.55□□□□□ -1.84
VPS50-209ENST00000467326 LRRC40Q9H9A6 602 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms