RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DDAH2O95865 285 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 ESR1P03372 595 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 EIF2S1P05198 315 aaKnown RBP18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CHRM3P20309 590 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 ATP5DP30049 168 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CMPK1P30085 196 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 YBX1P67809 324 aaKnown RBP18.3■□□□□ 0.52
COL9A3-206ENST00000466532 GBX1Q14549 363 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 HIF1AQ16665 826 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CRB2Q5IJ48 1285 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 AGAP7PQ5VUJ5 663 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 ZGRF1Q86YA3 2104 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 PARP9Q8IXQ6 854 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 OR4N4Q8N0Y3 316 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 VPS50Q96JG6 964 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 AGAP4Q96P64 663 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 TCF12Q99081 682 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 WDR77Q9BQA1 342 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-206ENST00000466532 ACAT2Q9BWD1 397 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CSAG2Q9Y5P2 127 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CPAMD8Q8IZJ3 1885 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 OR2A25A4D2G3 310 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 VSTM2BA6NLU5 285 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 CCDC175P0C221 793 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 OGNP20774 298 aaKnown RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ADARP55265 1226 aaKnown RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ELOAQ14241 798 aaKnown RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 NAA25Q14CX7 972 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 TRIP13Q15645 432 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ANKRD20A4Q4UJ75 823 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ACSBG2Q5FVE4 666 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 KIAA0930Q6ICG6 404 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 PRMT9Q6P2P2 845 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 OR11G2Q8NGC1 345 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 OR9A1PQ8NGU1 263 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 STT3BQ8TCJ2 826 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 PPP4R1Q8TF05 950 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ZFYVE21Q9BQ24 234 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 DPH7Q9BTV6 452 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 CRB3Q9BUF7 120 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 LHPPQ9H008 270 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 HOMER3Q9NSC5 361 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 STOX2Q9P2F5 926 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 GALPQ9UBC7 116 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 ERRFI1Q9UJM3 462 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-206ENST00000466532 NTNG1Q9Y2I2 539 aa18.29■□□□□ 0.52
COL9A3-206ENST00000466532 TEX15Q9BXT5 2789 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ANKUB1A6NFN9 424 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ARHGEF33A8MVX0 844 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 E5RI56 91 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 AVILO75366 819 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ERVK-10P10266 1014 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ERGP11308 486 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 PKMP14618 531 aaKnown RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 PAMP19021 973 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 CXCR5P32302 372 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 CARSP49589 748 aaKnown RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 VPS41P49754 854 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 SARNPP82979 210 aaKnown RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 OCA2Q04671 838 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 KLC1Q07866 573 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 TSTA3Q13630 321 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 KCNJ11Q14654 390 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 MUM1Q2TAK8 710 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 KLHL38Q2WGJ6 581 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 CASC4Q6P4E1 433 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 SUSD1Q6UWL2 747 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 IGFL2Q6UWQ7 119 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ZNF662Q6ZS27 426 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 PRSS58Q8IYP2 241 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 SMPDL3AQ92484 453 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 MIEF2Q96C03 454 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 THOC3Q96J01 351 aaKnown RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 AGPAT4Q9NRZ5 378 aa18.28■□□□□ 0.52
COL9A3-206ENST00000466532 ZNF282Q9UDV7 671 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 NOVA2Q9UNW9 492 aaKnown RBP18.28■□□□□ 0.52
COL9A3-206ENST00000466532 CACNA1DQ01668 2161 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 VPS26AO75436 327 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 PSIP1O75475 530 aaKnown RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 ZGLP1P0C6A0 271 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 FBLP22087 321 aaKnown RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 RPA3P35244 121 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 GPS1Q13098 491 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 FBXO42Q6P3S6 717 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 CENPUQ71F23 418 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 CILP2Q8IUL8 1156 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 PRELID2Q8N945 189 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 DNAJB14Q8TBM8 379 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 CABS1Q96KC9 395 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 C10orf90Q96M02 699 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 BARD1Q99728 777 aaKnown RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 MESP1Q9BRJ9 268 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 TRIM56Q9BRZ2 755 aaKnown RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 EPS8L2Q9H6S3 715 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 MRPS30Q9NP92 439 aaKnown RBP18.27■□□□□ 0.52
COL9A3-206ENST00000466532 FAM114A2Q9NRY5 505 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 SAMD15Q9P1V8 674 aa18.27■□□□□ 0.52
COL9A3-206ENST00000466532 VPS9D1Q9Y2B5 631 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms