RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 XRCC1P18887 633 aaPredicted RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 VARSP26640 1264 aaKnown RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 HSD17B2P37059 387 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 ERFP50548 548 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 CCNIQ14094 377 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 USP39Q53GS9 565 aaKnown RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRMT9Q6P2P2 845 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 TBC1D21Q8IYX1 336 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 MINDY1Q8N5J2 469 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 RNF148Q8N7C7 305 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 EHD1Q9H4M9 534 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 TMEM181Q9P2C4 612 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 PLAGL1Q9UM63 463 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRSS38A1L453 326 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 TRIM38O00635 465 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SEMA4FO95754 770 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 IGLV3-19P01714 112 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 BCKDHAP12694 445 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 HSD3B1P14060 373 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 ACPPP15309 386 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 HSD3B2P26439 372 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 FOXM1Q08050 763 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 TLR1Q15399 786 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 ATG9BQ674R7 924 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SYT13Q7L8C5 426 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 ZNF687Q8N1G0 1237 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 PGBD3Q8N328 593 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 LMNTD1Q8N9Z9 388 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 OR7G3Q8NG95 312 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SETD7Q8WTS6 366 aaKnown RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SLC5A11Q8WWX8 675 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 NECAB3Q96P71 396 aaPredicted RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 MTERF1Q99551 399 aaKnown RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 EFCAB11Q9BUY7 163 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 BRF2Q9HAW0 419 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SPATA6Q9NWH7 488 aaPredicted RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 STX18Q9P2W9 335 aaKnown RBP20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 SH2B3Q9UQQ2 575 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 GPSM3Q9Y4H4 160 aa20.43■□□□□ 0.86
PPP1R3F-203ENST00000466508 CROCCQ5TZA2 2017 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 BDP1A6H8Y1 2624 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 C10orf142B7Z368 130 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 H0Y8X5 98 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 FKBP6O75344 327 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 NFATC4Q14934 902 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRAMEF14Q5SWL7 426 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 THEMIS2Q5TEJ8 643 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRAMEF13Q5VWM6 474 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 RNF175Q8N4F7 328 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 GLB1L3Q8NCI6 653 aaPredicted RBP20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 LRRC58Q96CX6 371 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 BMFQ96LC9 184 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 C12orf66Q96MD2 445 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 ZBTB18Q99592 522 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 MENTQ9BUN1 341 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 IL1RL2Q9HB29 575 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 SUCOQ9UBS9 1254 aaKnown RBP20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 DLGAP4Q9Y2H0 992 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 MUC3AQ02505 3323 aa20.42■□□□□ 0.86
PPP1R3F-203ENST00000466508 CHURC1-FNTBB4DL54 471 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRPS2P11908 318 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PCSK2P16519 638 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 IDSP22304 550 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 MAPK1P28482 360 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 SLC7A2P52569 658 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 CYP2A13Q16696 494 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PAGE2BQ5JRK9 111 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PAGE3Q5JUK9 113 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 SAMD4BQ5PRF9 694 aaKnown RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 CATSPEREQ5SY80 951 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 C10orf62Q5T681 223 aaPredicted RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 DUS1LQ6P1R4 473 aaKnown RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 MED27Q6P2C8 311 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 AAGABQ6PD74 315 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 LCTLQ6UWM7 567 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 FAM9CQ8IZT9 166 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 SYNPOQ8N3V7 929 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 REPS1Q96D71 796 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 APIPQ96GX9 242 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 OR2M4Q96R27 311 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 INSM2Q96T92 566 aaPredicted RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 HAUS8Q9BT25 410 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 DPY30Q9C005 99 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 CARS2Q9HA77 564 aaKnown RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 SPATA7Q9P0W8 599 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 ABCD2Q9UBJ2 740 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 VPS29Q9UBQ0 182 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 CA14Q9ULX7 337 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 CA5BQ9Y2D0 317 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PLEKHM1Q9Y4G2 1056 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 PRORSD1PA6NEY8 169 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 ZNF839A8K0R7 811 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 C1GALT1C1LP0DN25 315 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 AMD1P17707 334 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 AP2B1P63010 937 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 DDX39BQ13838 428 aaKnown RBP20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 NFYCQ13952 458 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 FLOT2Q14254 428 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 ASB9Q96DX5 294 aa20.41■□□□□ 0.86
PPP1R3F-203ENST00000466508 METTL2AQ96IZ6 378 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms