RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 A0A075B6Q4 140 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 LOC100506127A0A0U1RQW1 187 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 hCG_2039718K7EN88 272 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 HSPA7P48741 367 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 RGS6P49758 472 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 ABRQ12979 859 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 LRRC26Q2I0M4 334 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 RAP1GAP2Q684P5 730 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 ERAP2Q6P179 960 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.2■□□□□ 0.66
SDF4-205ENST00000465727 SPATC1Q76KD6 591 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 EIF3MQ7L2H7 374 aaKnown RBP19.2■□□□□ 0.66
SDF4-205ENST00000465727 RPRD1AQ96P16 312 aaPredicted RBP19.2■□□□□ 0.66
SDF4-205ENST00000465727 SLC30A2Q9BRI3 323 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 SLC29A3Q9BZD2 475 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 NSUN3Q9H649 340 aaKnown RBP19.2■□□□□ 0.66
SDF4-205ENST00000465727 FKBPLQ9UIM3 349 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 OARD1Q9Y530 152 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 PCDHGB2Q9Y5G2 931 aa19.2■□□□□ 0.66
SDF4-205ENST00000465727 H7C0S8 307 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 FFAR3O14843 346 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 GPR42O15529 346 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 TLL1O43897 1013 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 B3GAT3O94766 335 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 PRPS2P11908 318 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 GGT2P36268 569 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 PRIM2P49643 509 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 GNG2P59768 71 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 VMACQ2NL98 169 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 ZRANB3Q5FWF4 1079 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 PPP2R2DQ66LE6 453 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 CBLL1Q75N03 491 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 GALNT12Q8IXK2 581 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 ST6GAL2Q96JF0 529 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 SDHCQ99643 169 aaPredicted RBP19.19■□□□□ 0.66
SDF4-205ENST00000465727 P2RY12Q9H244 342 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 TAS2R9Q9NYW1 312 aa19.19■□□□□ 0.66
SDF4-205ENST00000465727 FAM25AB3EWG3 89 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 FAM25CB3EWG5 89 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 FAM25GB3EWG6 89 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ADM5C9JUS6 153 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 MANBAO00462 879 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ADORA3P0DMS8 318 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 PRKCAP17252 672 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 KDELR2P33947 212 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 GRK5P34947 590 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 DOK6Q6PKX4 331 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ZNF517Q6ZMY9 492 aaPredicted RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 GGHQ92820 318 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 CEP19Q96LK0 163 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 PSKH2Q96QS6 385 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 MYOCQ99972 504 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 INPP5KQ9BT40 448 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 CD244Q9BZW8 370 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 OR51E2Q9H255 320 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 FBXO44Q9H4M3 255 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 C3orf14Q9HBI5 128 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ITM2CQ9NQX7 267 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 FARSBQ9NSD9 589 aaKnown RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 OLA1Q9NTK5 396 aaKnown RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 CHD5Q8TDI0 1954 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 H3BQ06 376 aaPredicted RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 RFXANKO14593 260 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 TAPBPO15533 448 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ITGA2P17301 1181 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 SLC19A1P41440 591 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 BRCC3P46736 316 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 ARMCX4Q5H9R4 360 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 RAB43Q86YS6 212 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 C9orf43Q8TAL5 461 aaPredicted RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 UBTD2Q8WUN7 234 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 CENPOQ9BU64 300 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 FAM126AQ9BYI3 521 aaPredicted RBP19.18■□□□□ 0.66
SDF4-205ENST00000465727 TBC1D24Q9ULP9 559 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 SNX6Q9UNH7 406 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 AP1M2Q9Y6Q5 423 aa19.18■□□□□ 0.66
SDF4-205ENST00000465727 TTC3P53804 2025 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 HAS3O00219 553 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 AOC2O75106 756 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 SLITRK5O94991 958 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 ITGB6P18564 788 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 RGS4P49798 205 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 PSEN2P49810 448 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.17■□□□□ 0.66
SDF4-205ENST00000465727 CSTF3Q12996 717 aaKnown RBP19.17■□□□□ 0.66
SDF4-205ENST00000465727 BCL7AQ4VC05 210 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 ZNF367Q7RTV3 350 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 ZNF551Q7Z340 670 aaPredicted RBP19.17■□□□□ 0.66
SDF4-205ENST00000465727 VN1R5Q7Z5H4 357 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 SAPCD2Q86UD0 394 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 GATAD2AQ86YP4 633 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 CPA6Q8N4T0 437 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 BEND7Q8N7W2 519 aaPredicted RBP19.17■□□□□ 0.66
SDF4-205ENST00000465727 CLHC1Q8NHS4 586 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 HSH2DQ96JZ2 352 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 Q96MT0 163 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 OR2A14Q96R47 310 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 SIRT5Q9NXA8 310 aa19.17■□□□□ 0.66
SDF4-205ENST00000465727 INSIG1O15503 277 aa19.16■□□□□ 0.66
SDF4-205ENST00000465727 DIRAS1O95057 198 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms