RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 PDE7BQ9NP56 450 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 SLC22A11Q9NSA0 550 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 CUEDC1Q9NWM3 386 aaPredicted RBP7.4□□□□□ -1.22
THBS3-205ENST00000465596 EURLQ9NYK6 297 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 IL17BQ9UHF5 180 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
THBS3-205ENST00000465596 PCDHGA6Q9Y5G7 932 aa7.4□□□□□ -1.22
THBS3-205ENST00000465596 FASNP49327 2511 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 NPEPPSL1A6NEC2 478 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ISM1B1AKI9 464 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 TARM1B6A8C7 271 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 TMEM150CB9EJG8 249 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RRP8O43159 456 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 ZBTB14O43829 449 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 KDM1AO60341 852 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CNOT3O75175 753 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 SCRG1O75711 98 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ONECUT2O95948 504 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ENO2P09104 434 aaPredicted RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 FURINP09958 794 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RHOXF2BP0C7M4 288 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CD1DP15813 335 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 NPPBP16860 134 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 MAP4P27816 1152 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 HSD17B2P37059 387 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SLC6A12P48065 614 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RGS4P49798 205 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ITGA1P56199 1179 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 AP1S2P56377 157 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RAB10P61026 200 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CDKL1Q00532 357 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ILF2Q12905 390 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 PDAP1Q13442 181 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 TSNQ15631 228 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 PRTGQ2VWP7 1150 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 GRTP1Q5TC63 336 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ARMC6Q6NXE6 501 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 FBXO42Q6P3S6 717 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 AGTRAPQ6RW13 159 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 COX15Q7KZN9 410 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 VN1R4Q7Z5H5 301 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 DSELQ8IZU8 1212 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 DTWD1Q8N5C7 304 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CT55Q8WUE5 264 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 DCAKDQ8WVC6 231 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SKA2Q8WVK7 121 aaPredicted RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 IFT81Q8WYA0 676 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SLC22A18Q96BI1 424 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 FBXL8Q96CD0 374 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SLC45A3Q96JT2 553 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 C10orf90Q96M02 699 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CCDC138Q96M89 665 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 GBP5Q96PP8 586 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 OR2A5Q96R48 311 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CCNL2Q96S94 520 aaPredicted RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 MIPEPQ99797 713 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RHOXF2Q9BQY4 288 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 PLCD4Q9BRC7 762 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 DPH7Q9BTV6 452 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SPRTNQ9H040 489 aaPredicted RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 LHX9Q9NQ69 397 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 INTS7Q9NVH2 962 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 SOHLH2Q9NX45 425 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 ANKMY1Q9P2S6 941 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 TAC3Q9UHF0 121 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
THBS3-205ENST00000465596 RARRES3Q9UL19 164 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SLC39A10Q9ULF5 831 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 OARD1Q9Y530 152 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 CNTRLQ7Z7A1 2325 aa7.39□□□□□ -1.23
THBS3-205ENST00000465596 SHANK1Q9Y566 2161 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 LOC105369274A0A096LPK9 316 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 LOC102723532A0A0G2JNH3 316 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 ESPNB1AK53 854 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 TAPBPO15533 448 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 P2RX6O15547 441 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 RIPK2O43353 540 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 ZNF749O43361 778 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 CPNE3O75131 537 aaKnown RBP7.38□□□□□ -1.23
THBS3-205ENST00000465596 ACSL3O95573 720 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 NTRK1P04629 796 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 MTHFD2P13995 350 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 EPORP19235 508 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 SPRP35270 261 aaPredicted RBP7.38□□□□□ -1.23
THBS3-205ENST00000465596 GGT5P36269 586 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 PPM1FP49593 454 aaPredicted RBP7.38□□□□□ -1.23
THBS3-205ENST00000465596 UCNP55089 124 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 NFKB2Q00653 900 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 IRF9Q00978 393 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
THBS3-205ENST00000465596 BMPR2Q13873 1038 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms