RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HSD17B2P37059 387 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 KCNC1P48547 511 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 TLE3Q04726 772 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 COL28A1Q2UY09 1125 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
CUX1-207ENST00000465461 ICE2Q659A1 982 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 FRMPD2BQ6IN97 320 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 FBXO42Q6P3S6 717 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 FAM199XQ6PEV8 388 aaPredicted RBP11.2□□□□□ -0.62
CUX1-207ENST00000465461 PLD3Q8IV08 490 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 MCATQ8IVS2 390 aaKnown RBP11.2□□□□□ -0.62
CUX1-207ENST00000465461 CACNA2D3Q8IZS8 1091 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 EXT2Q93063 718 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 ESAMQ96AP7 390 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 UBXN10Q96LJ8 280 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 EGFL8Q99944 293 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 ZPBPQ9BS86 351 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 TRIM54Q9BYV2 358 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 B3GNT4Q9C0J1 378 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 DERL2Q9GZP9 239 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 VPS11Q9H270 941 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 FANCEQ9HB96 536 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 CPNE5Q9HCH3 593 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 CCDC177Q9NQR7 707 aaPredicted RBP11.2□□□□□ -0.62
CUX1-207ENST00000465461 INTS7Q9NVH2 962 aaKnown RBP11.2□□□□□ -0.62
CUX1-207ENST00000465461 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 EURLQ9NYK6 297 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 TMEM184BQ9Y519 407 aaPredicted RBP11.2□□□□□ -0.62
CUX1-207ENST00000465461 OARD1Q9Y530 152 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 SPTBP11277 2137 aa11.2□□□□□ -0.62
CUX1-207ENST00000465461 A0A096LPK6 155 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 LOC105369274A0A096LPK9 316 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 LOC102723532A0A0G2JNH3 316 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 PABPN1LA6NDY0 278 aaKnown RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 ZNF839A8K0R7 811 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 H3BMH7 237 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 H7BY64 318 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ZNF749O43361 778 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 OR2B3O76000 313 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 STATHP02808 62 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ABHD2P08910 425 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 CD82P27701 267 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 CRABP2P29373 138 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 TYK2P29597 1187 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 GDF5P43026 501 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 GLRBP48167 497 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 CSRP3P50461 194 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ITGA1P56199 1179 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 VSX2P58304 361 aaPredicted RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 PRDX1Q06830 199 aaKnown RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 GPS2Q13227 327 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 PRAMEF13Q5VWM6 474 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 C6orf15Q6UXA7 325 aaPredicted RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 FRA10AC1Q70Z53 315 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ADCK2Q7Z695 626 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 TBC1D1Q86TI0 1168 aaPredicted RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 NLGN4XQ8N0W4 816 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 OR4N4Q8N0Y3 316 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 PLD6Q8N2A8 252 aaKnown RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 IL22RA1Q8N6P7 574 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ZNF655Q8N720 491 aaPredicted RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 NLGN4YQ8NFZ3 816 aaPredicted RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 ZUFSPQ96AP4 578 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 FBXL8Q96CD0 374 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 CLIP3Q96DZ5 547 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 PRAP1Q96NZ9 151 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 OR4K3Q96R72 315 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 RUFY1Q96T51 708 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 DPH1Q9BZG8 443 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 SERTAD3Q9UJW9 196 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 NOVA2Q9UNW9 492 aaKnown RBP11.19□□□□□ -0.62
CUX1-207ENST00000465461 PLCL2Q9UPR0 1127 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 ACOT9Q9Y305 439 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 IKBKGQ9Y6K9 419 aa11.19□□□□□ -0.62
CUX1-207ENST00000465461 CELSR3Q9NYQ7 3312 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 OR2A25A4D2G3 310 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TARM1B6A8C7 271 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TRIM49D1C9J1S8 452 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 E7EQ34 232 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 HAT1O14929 419 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TAPBPO15533 448 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 EIF2S1P05198 315 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 ANXA5P08758 320 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 ENO2P09104 434 aaPredicted RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 LTA4HP09960 611 aaKnown RBP11.18□□□□□ -0.62
CUX1-207ENST00000465461 LIFP15018 202 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 NPPBP16860 134 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 TFEBP19484 476 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 F8A1P23610 371 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 SERPINB8P50452 374 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 AP1S2P56377 157 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 ATP6V0D1P61421 351 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 CXADRP78310 365 aa11.18□□□□□ -0.62
CUX1-207ENST00000465461 MEF2AQ02078 507 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms