RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	NEUROG1	Q92886	237 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NSUN4	Q96CB9	384 aa	Known RBP	4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ERP27	Q96DN0	273 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C8orf76	Q96K31	380 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SPAG5	Q96R06	1193 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	XPO4	Q9C0E2	1151 aa	Known RBP	4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SH2D4A	Q9H788	454 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PPP1R3E	Q9H7J1	279 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NOX4	Q9NPH5	578 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CNGB3	Q9NQW8	809 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BATF3	Q9NR55	127 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OCIAD1	Q9NX40	245 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF532	Q9HCE3	1301 aa		4.9	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TCHH	Q07283	1943 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LRRK1	Q38SD2	2015 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CSPG4	Q6UVK1	2322 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BOLA2-SMG1P6	H3BVE0	249 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GTPBP1	O00178	669 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KCNJ13	O60928	360 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	N4BP1	O75113	896 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RPS6KA5	O75582	802 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	OAZ2	O95190	189 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FTCD	O95954	541 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PRSS2	P07478	247 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CD58	P19256	250 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CD9	P21926	228 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MCM3	P25205	808 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HOXD13	P35453	343 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PDLIM4	P50479	330 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SLC8A3	P57103	927 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TUBA1B	P68363	451 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IK	Q13123	557 aa	Predicted RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SLMAP	Q14BN4	828 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NAB2	Q15742	525 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CCDC14	Q49A88	953 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CDON	Q4KMG0	1287 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RARS2	Q5T160	578 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	LRIF1	Q5T3J3	769 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CAVIN1	Q6NZI2	390 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PQLC2	Q6ZP29	291 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TUBA1A	Q71U36	451 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TAOK1	Q7L7X3	1001 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ADGRA1	Q86SQ6	560 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MFN1	Q8IWA4	741 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	APPL2	Q8NEU8	664 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FAM81A	Q8TBF8	368 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TMED6	Q8WW62	240 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	POMGNT1	Q8WZA1	660 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MIB2	Q96AX9	1013 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF689	Q96CS4	500 aa	Predicted RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ARHGEF26	Q96DR7	871 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	C1orf74	Q96LT6	269 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PCGF1	Q9BSM1	259 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HAUS8	Q9BT25	410 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CAPS2	Q9BXY5	557 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SMARCAD1	Q9H4L7	1026 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PDZD7	Q9H5P4	517 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CLIC5	Q9NZA1	410 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CHMP5	Q9NZZ3	219 aa		4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DDX25	Q9UHL0	483 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	AGO1	Q9UL18	857 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FLNA	P21333	2647 aa	Known RBP	4.89	□□□□□ -1.63
CACNA1C-223	ENST00000465278	MYH8	P13535	1937 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CEP192	Q8TEP8	1941 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IGLV5-52	A0A0A0MRZ9	124 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GOLGA6L9	A6NEM1	432 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TRABD2B	A6NFA1	517 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278		H0YC42	278 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SOCS6	O14544	535 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	VILL	O15195	856 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RRP8	O43159	456 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NDUFS7	O75251	213 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	RTN2	O75298	545 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	NEBL	O76041	1014 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SLC25A27	O95847	323 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SNHG28	P0DPA3	235 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PC	P11498	1178 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	ZNF12	P17014	697 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	IL4R	P24394	825 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GARS	P41250	739 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	HTR6	P50406	440 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CDH8	P55286	799 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	TPD52	P55327	224 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PRAME	P78395	509 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	BTG3	Q14201	252 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SMC1A	Q14683	1233 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	COG2	Q14746	738 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PTGIS	Q16647	500 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	SBK1	Q52WX2	424 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GGNBP1	Q5YKI7	109 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	PLEKHA7	Q6IQ23	1121 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	METTL2B	Q6P1Q9	378 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	WDR73	Q6P4I2	378 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	CHST9	Q7L1S5	443 aa		4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	DZIP1	Q86YF9	867 aa	Known RBP	4.88	□□□□□ -1.63
CACNA1C-223	ENST00000465278	FOXRED2	Q8IWF2	684 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms