RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PHKG1Q16816 387 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 MEP1BQ16820 701 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TYSND1Q2T9J0 566 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CTU2Q2VPK5 515 aaKnown RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 LBHQ53QV2 105 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TCTE1Q5JU00 501 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SLC35D3Q5M8T2 416 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SPOUT1Q5T280 376 aaKnown RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SHEQ5VZ18 495 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 LYSMD4Q5XG99 296 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TXNRD3NBQ6F5E7 133 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 OR4A47Q6IF82 309 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM166AQ6J272 317 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 UGT3A1Q6NUS8 523 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZNF790Q6PG37 636 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PSRC1Q6PGN9 363 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ENPP7Q6UWV6 458 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CEACAM20Q6UY09 585 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 MSANTD1Q6ZTZ1 278 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM47EQ6ZV65 393 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SLC26A9Q7LBE3 791 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SLC16A9Q7RTY1 509 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TRMT1LQ7Z2T5 733 aaKnown RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 NOTCH2NLQ7Z3S9 236 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 NRARPQ7Z6K4 114 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ISCA2Q86U28 154 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 RTN4RL2Q86UN3 420 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 KLHDC8BQ8IXV7 354 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 KIRREL3Q8IZU9 778 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 APCDD1Q8J025 514 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 LGI2Q8N0V4 545 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 NDUFAF2Q8N183 169 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 DNAJC22Q8N4W6 341 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZNF383Q8NA42 475 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 OR10V1Q8NGI7 309 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 FAM76AQ8TAV0 307 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 LRRC8CQ8TDW0 803 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 HEXDCQ8WVB3 486 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 PROX1Q92786 737 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 LGALS12Q96DT0 336 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GIMAP5Q96F15 307 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 SPATA17Q96L03 361 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZNF354BQ96LW1 612 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 C10orf90Q96M02 699 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GDAP1L1Q96MZ0 367 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 INTS14Q96SY0 518 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CITED2Q99967 270 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZMYND12Q9H0C1 365 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 THAP2Q9H0W7 228 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 BICC1Q9H694 974 aaKnown RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ATP13A3Q9H7F0 1226 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZWILCHQ9H900 591 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ZNF71Q9NQZ8 489 aaPredicted RBP1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ECHDC1Q9NTX5 307 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TMEM181Q9P2C4 612 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 TXNDC16Q9P2K2 825 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 CDH7Q9ULB5 785 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 GRID1Q9ULK0 1009 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 ICAM5Q9UMF0 924 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 RIPK3Q9Y572 518 aa1.71□□□□□ -2.14
NUCKS1-202ENST00000464938 IL16Q14005 1332 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 A0A087X002 238 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 TRAV34A0A0B4J273 112 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 OOEPA6NGQ2 149 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 KLF11O14901 512 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SNX3O60493 162 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CIDEAO60543 219 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SELENOFO60613 162 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 FCGR3BO75015 233 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 GLRA3O75311 464 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 ZFAND5O76080 213 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 BAG3O95817 575 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 RPN1P04843 607 aaKnown RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SPP1P10451 314 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 KRT3P12035 628 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CEACAM1P13688 526 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 GNB3P16520 340 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CEBPBP17676 345 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CDH3P22223 829 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 PSMB4P28070 264 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CSTF2P33240 577 aaKnown RBP eCLIP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CACNG1Q06432 222 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 ILF2Q12905 390 aaKnown RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 RBM39Q14498 530 aaKnown RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 TAF13Q15543 124 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 EXT1Q16394 746 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 UGP2Q16851 508 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 GPR33Q49SQ1 333 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SLC25A53Q5H9E4 307 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CYB5D1Q6P9G0 228 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 BTNL8Q6UX41 500 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 TMEM182Q6ZP80 229 aaPredicted RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SPATA31D1Q6ZQQ2 1576 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 LINC00696Q6ZRV3 163 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 CPEB2Q7Z5Q1 589 aaKnown RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 GPR141Q7Z602 305 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 SIX6OS1Q8N1H7 587 aa1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 RYBPQ8N488 228 aaPredicted RBP1.7□□□□□ -2.14
NUCKS1-202ENST00000464938 DCLK2Q8N568 766 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms