RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 C7orf69Q9H7B7 122 aa8.93□□□□□ -0.98
APP-213ENST00000464867 CUTCQ9NTM9 273 aa8.93□□□□□ -0.98
APP-213ENST00000464867 EURLQ9NYK6 297 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ZNF282Q9UDV7 671 aaPredicted RBP8.93□□□□□ -0.98
APP-213ENST00000464867 TRPS1Q9UHF7 1281 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ZNF711Q9Y462 761 aa8.93□□□□□ -0.98
APP-213ENST00000464867 ARID1AO14497 2285 aa8.93□□□□□ -0.98
APP-213ENST00000464867 SUN1O94901 812 aa8.92□□□□□ -0.98
APP-213ENST00000464867 TGFB1P01137 390 aa8.92□□□□□ -0.98
APP-213ENST00000464867 CTSBP07858 339 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ZGLP1P0C6A0 271 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ITGAMP11215 1152 aa8.92□□□□□ -0.98
APP-213ENST00000464867 UGT2B7P16662 529 aa8.92□□□□□ -0.98
APP-213ENST00000464867 BMP7P18075 431 aa8.92□□□□□ -0.98
APP-213ENST00000464867 GABRA4P48169 554 aa8.92□□□□□ -0.98
APP-213ENST00000464867 EMP2P54851 167 aa8.92□□□□□ -0.98
APP-213ENST00000464867 FMO1Q01740 532 aa8.92□□□□□ -0.98
APP-213ENST00000464867 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
APP-213ENST00000464867 AP1B1Q10567 949 aa8.92□□□□□ -0.98
APP-213ENST00000464867 OR1C1Q15619 314 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ZIC1Q15915 447 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ATP13A4Q4VNC1 1196 aa8.92□□□□□ -0.98
APP-213ENST00000464867 Q5PR19 223 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ZDHHC20Q5W0Z9 365 aa8.92□□□□□ -0.98
APP-213ENST00000464867 COX15Q7KZN9 410 aa8.92□□□□□ -0.98
APP-213ENST00000464867 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.92□□□□□ -0.98
APP-213ENST00000464867 TRIM73Q86UV7 250 aa8.92□□□□□ -0.98
APP-213ENST00000464867 SIAH3Q8IW03 269 aa8.92□□□□□ -0.98
APP-213ENST00000464867 TRIM42Q8IWZ5 723 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ADGRF3Q8IZF5 1079 aa8.92□□□□□ -0.98
APP-213ENST00000464867 MARVELD2Q8N4S9 558 aa8.92□□□□□ -0.98
APP-213ENST00000464867 DNAJC22Q8N4W6 341 aa8.92□□□□□ -0.98
APP-213ENST00000464867 OR52E1Q8NGJ3 308 aa8.92□□□□□ -0.98
APP-213ENST00000464867 STT3BQ8TCJ2 826 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.92□□□□□ -0.98
APP-213ENST00000464867 LRRC46Q96FV0 321 aa8.92□□□□□ -0.98
APP-213ENST00000464867 SEC16BQ96JE7 1060 aa8.92□□□□□ -0.98
APP-213ENST00000464867 RMDN2Q96LZ7 410 aa8.92□□□□□ -0.98
APP-213ENST00000464867 MVB12BQ9H7P6 319 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ZNF304Q9HCX3 659 aa8.92□□□□□ -0.98
APP-213ENST00000464867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.92□□□□□ -0.982e-8■■■■□ 22
APP-213ENST00000464867 GNPTGQ9UJJ9 305 aa8.92□□□□□ -0.98
APP-213ENST00000464867 TMPRSS11EQ9UL52 423 aa8.92□□□□□ -0.98
APP-213ENST00000464867 ALG6Q9Y672 507 aa8.92□□□□□ -0.98
APP-213ENST00000464867 SCN2AQ99250 2005 aa8.92□□□□□ -0.98
APP-213ENST00000464867 DNAJC13O75165 2243 aa8.91□□□□□ -0.98
APP-213ENST00000464867 IGHV1-45A0A0A0MS14 117 aa8.91□□□□□ -0.98
APP-213ENST00000464867 A0A0J9YY10 115 aa8.91□□□□□ -0.98
APP-213ENST00000464867 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
APP-213ENST00000464867 A0A1B0GTH9 108 aa8.91□□□□□ -0.98
APP-213ENST00000464867 HMX2A2RU54 273 aa8.91□□□□□ -0.98
APP-213ENST00000464867 F8VZ95 297 aa8.91□□□□□ -0.98
APP-213ENST00000464867 DDX3XO00571 662 aaKnown RBP eCLIP8.91□□□□□ -0.98
APP-213ENST00000464867 MATN3O15232 486 aa8.91□□□□□ -0.98
APP-213ENST00000464867 GFPT2O94808 682 aa8.91□□□□□ -0.98
APP-213ENST00000464867 PIRTP0C851 137 aa8.91□□□□□ -0.98
APP-213ENST00000464867 SHMT2P34897 504 aa8.91□□□□□ -0.98
APP-213ENST00000464867 CD86P42081 329 aa8.91□□□□□ -0.98
APP-213ENST00000464867 DLX5P56178 289 aa8.91□□□□□ -0.98
APP-213ENST00000464867 OC90Q02509 493 aaPredicted RBP8.91□□□□□ -0.98
APP-213ENST00000464867 IHHQ14623 411 aa8.91□□□□□ -0.98
APP-213ENST00000464867 TCTE1Q5JU00 501 aa8.91□□□□□ -0.98
APP-213ENST00000464867 CATSPEREQ5SY80 951 aa8.91□□□□□ -0.98
APP-213ENST00000464867 KLHDC7AQ5VTJ3 777 aa8.91□□□□□ -0.98
APP-213ENST00000464867 KDELC1Q6UW63 502 aa8.91□□□□□ -0.98
APP-213ENST00000464867 DET1Q7L5Y6 550 aa8.91□□□□□ -0.98
APP-213ENST00000464867 GALNTL5Q7Z4T8 443 aa8.91□□□□□ -0.98
APP-213ENST00000464867 MCATQ8IVS2 390 aaKnown RBP8.91□□□□□ -0.98
APP-213ENST00000464867 CIARTQ8N365 385 aaPredicted RBP8.91□□□□□ -0.98
APP-213ENST00000464867 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
APP-213ENST00000464867 OR5M3Q8NGP4 307 aa8.91□□□□□ -0.98
APP-213ENST00000464867 ARRDC2Q8TBH0 407 aa8.91□□□□□ -0.98
APP-213ENST00000464867 FAM222BQ8WU58 562 aa8.91□□□□□ -0.98
APP-213ENST00000464867 MESP1Q9BRJ9 268 aa8.91□□□□□ -0.98
APP-213ENST00000464867 XKR8Q9H6D3 395 aa8.91□□□□□ -0.98
APP-213ENST00000464867 BPIFA1Q9NP55 256 aa8.91□□□□□ -0.98
APP-213ENST00000464867 DMRT3Q9NQL9 472 aa8.91□□□□□ -0.98
APP-213ENST00000464867 ETNK2Q9NVF9 386 aa8.91□□□□□ -0.98
APP-213ENST00000464867 CRIM1Q9NZV1 1036 aa8.91□□□□□ -0.98
APP-213ENST00000464867 MAN1B1Q9UKM7 699 aa8.91□□□□□ -0.98
APP-213ENST00000464867 MAU2Q9Y6X3 613 aa8.91□□□□□ -0.98
APP-213ENST00000464867 MPDZO75970 2070 aa8.91□□□□□ -0.98
APP-213ENST00000464867 SNRNP200O75643 2136 aaKnown RBP8.9□□□□□ -0.98
APP-213ENST00000464867 GOLGA6L4A6NEF3 574 aa8.9□□□□□ -0.98
APP-213ENST00000464867 CES2O00748 559 aa8.9□□□□□ -0.98
APP-213ENST00000464867 TFECO14948 347 aaPredicted RBP8.9□□□□□ -0.98
APP-213ENST00000464867 CDC40O60508 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
APP-213ENST00000464867 HEXBP07686 556 aa8.9□□□□□ -0.98
APP-213ENST00000464867 CELA2AP08217 269 aa8.9□□□□□ -0.98
APP-213ENST00000464867 UCHL3P15374 230 aa8.9□□□□□ -0.98
APP-213ENST00000464867 CHRNB2P17787 502 aa8.9□□□□□ -0.98
APP-213ENST00000464867 MIPP30301 263 aa8.9□□□□□ -0.98
APP-213ENST00000464867 ZFP36L2P47974 494 aaKnown RBP8.9□□□□□ -0.98
APP-213ENST00000464867 NUP107P57740 925 aa8.9□□□□□ -0.98
APP-213ENST00000464867 NIPAL4Q0D2K0 466 aa8.9□□□□□ -0.98
APP-213ENST00000464867 PRKG2Q13237 762 aa8.9□□□□□ -0.98
APP-213ENST00000464867 TUBA3CQ13748 450 aa8.9□□□□□ -0.98
APP-213ENST00000464867 ITGA9Q13797 1035 aa8.9□□□□□ -0.98
APP-213ENST00000464867 BECN1Q14457 450 aa8.9□□□□□ -0.98
APP-213ENST00000464867 MAPKAPK3Q16644 382 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms