RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TBPL1P62380 186 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CDKL1Q00532 357 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CLN3Q13286 438 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 TGIF1Q15583 401 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 ERCC6LQ2NKX8 1250 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 ICE2Q659A1 982 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CAPN13Q6MZZ7 669 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 WDR93Q6P2C0 686 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 FRA10AC1Q70Z53 315 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 UBLCP1Q8WVY7 318 aaPredicted RBP13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 CCDC77Q9BR77 488 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 DHRS4Q9BTZ2 278 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 PCBD2Q9H0N5 130 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 NMRAL1Q9HBL8 299 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 WDR70Q9NW82 654 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 PLCL2Q9UPR0 1127 aa13.95□□□□□ -0.18
SQSTM1-205ENST00000464493 SPTBP11277 2137 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 A0A096LPK6 155 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 HCRTR1O43613 425 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 SCRG1O75711 98 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 TIAF1O95411 115 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 DLGAP3O95886 979 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ALDOAP04075 364 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 NTRK1P04629 796 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 LTA4HP09960 611 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 GABRA4P48169 554 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 HNMTP50135 292 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ITGA1P56199 1179 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ABATP80404 500 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 DLG1Q12959 904 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 TGFBIQ15582 683 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ZXDCQ2QGD7 858 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 DEFB110Q30KQ9 67 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 TAF1BQ53T94 588 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 LGSNQ5TDP6 509 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 PRAMEF13Q5VWM6 474 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 TIPARPQ7Z3E1 657 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 GPSM1Q86YR5 675 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 TMEM126BQ8IUX1 230 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 MCATQ8IVS2 390 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 SPACA3Q8IXA5 215 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 GPR135Q8IZ08 494 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 NLGN4XQ8N0W4 816 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 NLGN4YQ8NFZ3 816 aaPredicted RBP13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 OR56A3Q8NH54 315 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 NKD1Q969G9 470 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 KIAA1191Q96A73 305 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 PTERQ96BW5 349 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 RNF31Q96EP0 1072 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 EGFL8Q99944 293 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 SGPP1Q9BX95 441 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 SLC6A20Q9NP91 592 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 IGSF5Q9NSI5 407 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 EURLQ9NYK6 297 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 ANKMY1Q9P2S6 941 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 FETUBQ9UGM5 382 aa13.94□□□□□ -0.18
SQSTM1-205ENST00000464493 DSPP15924 2871 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 OR2A25A4D2G3 310 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 E7EQ34 232 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 RAD1O60671 282 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 OR2B3O76000 313 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 KRT37O76014 449 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 NPPBP16860 134 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 ITPKBP27987 946 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 GCAP28676 217 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 ATP1A2P50993 1020 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 MAP7Q14244 749 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 OR4D1Q15615 310 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 FAM83EQ2M2I3 478 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 PRAMEF17Q5VTA0 474 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 FBXO42Q6P3S6 717 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 LCTLQ6UWM7 567 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 C6orf15Q6UXA7 325 aaPredicted RBP13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 ISCA2Q86U28 154 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 CACNA2D3Q8IZS8 1091 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 IL22RA1Q8N6P7 574 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 GALNT6Q8NCL4 622 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 STAG3L4Q8TBR4 150 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 ISL2Q96A47 359 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 PYCR2Q96C36 320 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 NXNL1Q96CM4 212 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 SPRTNQ9H040 489 aaPredicted RBP13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 SNX7Q9UNH6 387 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 PCDHB3Q9Y5E6 796 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
SQSTM1-205ENST00000464493 TEX51A0A1B0GUA7 166 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 NCF1BA6NI72 391 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 NCF1CA8MVU1 366 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 TRIM49D1C9J1S8 452 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms