RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 H2AFB2P0C5Z0 115 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 G6PDP11413 515 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ANXA8P13928 327 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 SLC2A4P14672 509 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 AGXTP21549 392 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PSMA3P25788 255 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 HOXA11P31270 313 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 PIGAP37287 484 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 IL12RB1P42701 662 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PTGER3P43115 390 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 MAGEA11P43364 429 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 HTR3AP46098 478 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZFP36L2P47974 494 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 IST1P53990 364 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 MLLT6P55198 1093 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 FOXA1P55317 472 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ITGA1P56199 1179 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 NCS1P62166 190 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TSPY1Q01534 308 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 SLC13A2Q13183 592 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 VEZF1Q14119 521 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 E2F2Q14209 437 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TAF1AQ15573 450 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 TAB1Q15750 504 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 LRIF1Q5T3J3 769 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 PIK3R6Q5UE93 754 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 LYPLAL1Q5VWZ2 237 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TMEM236Q5W0B7 351 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 WSCD1Q658N2 575 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 GDF6Q6KF10 455 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZCCHC8Q6NZY4 707 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TMEM207Q6UWW9 146 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 CERS6Q6ZMG9 384 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZNF517Q6ZMY9 492 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 PAQR9Q6ZVX9 377 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 DET1Q7L5Y6 550 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 SLC46A3Q7Z3Q1 461 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 MILR1Q7Z6M3 343 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZNF605Q86T29 641 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZSWIM9Q86XI8 627 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 CALHM3Q86XJ0 350 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 RNF130Q86XS8 419 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 FBXO16Q8IX29 292 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 TCAIMQ8N3R3 496 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 STX19Q8N4C7 294 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PARP16Q8N5Y8 322 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 NETO2Q8NC67 525 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 LSM14AQ8ND56 463 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 IL17RDQ8NFM7 739 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 OR6F1Q8NGZ6 308 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 OR10A6Q8NH74 314 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 AP3S1Q92572 193 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 NDRG1Q92597 394 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 NELL1Q92832 810 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 KIAA1143Q96AT1 154 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 SENP8Q96LD8 212 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 Q96MT0 163 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 OR52E6Q96RD3 313 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 KCNA7Q96RP8 456 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 CDK5RAP1Q96SZ6 601 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 SMOQ99835 787 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ACBD6Q9BR61 282 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 EMILIN2Q9BXX0 1053 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 RNF38Q9H0F5 515 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ZNF556Q9HAH1 456 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 RPRD1BQ9NQG5 326 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 TMEM248Q9NWD8 314 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 ADPRHL2Q9NX46 363 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TAS2R9Q9NYW1 312 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 CNOT2Q9NZN8 540 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 UXTQ9UBK9 157 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 SPASTQ9UBP0 616 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 KLQ9UEF7 1012 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TRPS1Q9UHF7 1281 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PSORS1C1Q9UIG5 152 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TMEFF2Q9UIK5 374 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 KLHL21Q9UJP4 597 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 TLR6Q9Y2C9 796 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 RBMX2Q9Y388 322 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 SAMHD1Q9Y3Z3 626 aaKnown RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 POLR3HQ9Y535 204 aaPredicted RBP7□□□□□ -1.29
CLSTN1-204ENST00000464286 PCDHB14Q9Y5E9 798 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PCDHGB3Q9Y5G1 929 aa7□□□□□ -1.29
CLSTN1-204ENST00000464286 PATJQ8NI35 1801 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 IRGMA1A4Y4 181 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 CLCA1A8K7I4 914 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 CLDN5O00501 218 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 DLL1O00548 723 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 E2F3O00716 465 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 HOXC11O43248 304 aaPredicted RBP6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 XPNPEP2O43895 674 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 RAMP2O60895 175 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 ULK1O75385 1050 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 OR4F21O95013 312 aa6.99□□□□□ -1.29
CLSTN1-204ENST00000464286 PGLSO95336 258 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms