RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX17-205ENST00000464279 IL17CQ9P0M4 197 aa11.98□□□□□ -0.49
SNX17-205ENST00000464279 POMT2Q9UKY4 750 aa11.98□□□□□ -0.49
SNX17-205ENST00000464279 MRPS2Q9Y399 296 aaKnown RBP11.98□□□□□ -0.49
SNX17-205ENST00000464279 ARL5AQ9Y689 179 aa11.98□□□□□ -0.49
SNX17-205ENST00000464279 AP1M2Q9Y6Q5 423 aa11.98□□□□□ -0.49
SNX17-205ENST00000464279 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 C2orf81A6NN90 581 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 ADAM10O14672 748 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 BUD23O43709 281 aaKnown RBP11.97□□□□□ -0.49
SNX17-205ENST00000464279 USP1O94782 785 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TOXO94900 526 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 CRTAMO95727 393 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TSPAN12O95859 305 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TPH1P17752 444 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TPSB2P20231 275 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 CTSCP53634 463 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TERF1P54274 439 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 DR1Q01658 176 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
SNX17-205ENST00000464279 C2orf54Q08AI8 447 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 CDH17Q12864 832 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 PRKAA1Q13131 559 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 KCNJ11Q14654 390 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 POU6F1Q14863 301 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TPSAB1Q15661 275 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 RPE65Q16518 533 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 SYDE1Q6ZW31 735 aaPredicted RBP11.97□□□□□ -0.49
SNX17-205ENST00000464279 ZNF572Q7Z3I7 529 aaPredicted RBP11.97□□□□□ -0.49
SNX17-205ENST00000464279 ZNF547Q8IVP9 402 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 COX4I2Q96KJ9 171 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 KRT12Q99456 494 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
SNX17-205ENST00000464279 KCNJ16Q9NPI9 418 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 RAD18Q9NS91 495 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 TXLNGQ9NUQ3 528 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 PKP3Q9Y446 797 aa11.97□□□□□ -0.49
SNX17-205ENST00000464279 GSAPA4D1B5 854 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 FAM227AF5H4B4 570 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 F10P00742 488 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 RAF1P04049 648 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 UQCRHP07919 91 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 MYBL2P10244 700 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 PTPRCAPQ14761 206 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 RBBP7Q16576 425 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 WHAMMP3Q1A5X7 153 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 ZDHHC20Q5W0Z9 365 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 NAPRTQ6XQN6 538 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 ZNF534Q76KX8 674 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 DOLPP1Q86YN1 238 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 CLYBLQ8N0X4 340 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 TRAM1L1Q8N609 369 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 SIMC1Q8NDZ2 872 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 OR11G2Q8NGC1 345 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 OR4K2Q8NGD2 314 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 LILRB4Q8NHJ6 448 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 GOT1L1Q8NHS2 421 aaPredicted RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 KIF18AQ8NI77 898 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 N4BP2L2Q92802 583 aaPredicted RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 C19orf43Q9BQ61 176 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 SPATA16Q9BXB7 569 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 IL26Q9NPH9 171 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 PTGFRNQ9P2B2 879 aa11.96□□□□□ -0.49
SNX17-205ENST00000464279 DHCR7Q9UBM7 475 aaKnown RBP11.96□□□□□ -0.49
SNX17-205ENST00000464279 MATN2O00339 956 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 TTI1O43156 1089 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 OR2B3O76000 313 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 PRAMEF1O95521 474 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 ST6GAL1P15907 406 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 POLR2CP19387 275 aaPredicted RBP11.95□□□□□ -0.5
SNX17-205ENST00000464279 CHRNB4P30926 498 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
SNX17-205ENST00000464279 PDPK2PQ6A1A2 396 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 LRRC8BQ6P9F7 803 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 FAM151BQ6UXP7 276 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 CDHR3Q6ZTQ4 885 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 KBTBD2Q8IY47 623 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 FKBP10Q96AY3 582 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 DNAJC1Q96KC8 554 aaKnown RBP11.95□□□□□ -0.5
SNX17-205ENST00000464279 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 ZSCAN5AQ9BUG6 496 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 UCK2Q9BZX2 261 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 TSPAN10Q9H1Z9 355 aaPredicted RBP11.95□□□□□ -0.5
SNX17-205ENST00000464279 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 IMP3Q9NV31 184 aaKnown RBP11.95□□□□□ -0.5
SNX17-205ENST00000464279 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
SNX17-205ENST00000464279 CCDC88CQ9P219 2028 aa11.94□□□□□ -0.5
SNX17-205ENST00000464279 GLYATL1P3A0A0U1RQE8 302 aa11.94□□□□□ -0.5
SNX17-205ENST00000464279 MROH6A6NGR9 719 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms