RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 FAM46DQ8NEK8 389 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 OR4E2Q8NGC2 313 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 HMGCLL1Q8TB92 370 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 LMX1AQ8TE12 382 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 SH3KBP1Q96B97 665 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 SPNS1Q9H2V7 528 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 SLC40A1Q9NP59 571 aa14.9□□□□□ -0.02
GYPC-205ENST00000464053 COPG1Q9Y678 874 aaKnown RBP14.9□□□□□ -0.02
GYPC-205ENST00000464053 ZNF839A8K0R7 811 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 UBDO15205 165 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 SDC3O75056 442 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 KRT6AP02538 564 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 KRT6BP04259 564 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 XRCC1P18887 633 aaPredicted RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 NDUFS1P28331 727 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 PEBP1P30086 187 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 KRT6CP48668 564 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 HMGCS1Q01581 520 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 GPR18Q14330 331 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 TBCCQ15814 346 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 ATG9BQ674R7 924 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 NXPE4Q6UWF7 544 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 TRIM46Q7Z4K8 759 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 CHCHD4Q8N4Q1 142 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 WDR20Q8TBZ3 569 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 SLC37A2Q8TED4 501 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 ZDHHC1Q8WTX9 485 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 SELENOMQ8WWX9 145 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 LCN9Q8WX39 176 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 PTCD3Q96EY7 689 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 CCT7Q99832 543 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 HAUS8Q9BT25 410 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 RAB11FIP5Q9BXF6 653 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 ELOVL6Q9H5J4 265 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 CUEDC1Q9NWM3 386 aaPredicted RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 CPNE7Q9UBL6 633 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 FBXO4Q9UKT5 387 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 SNX6Q9UNH7 406 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 B4DGG1 531 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 YY2O15391 372 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 C1GALT1C1LP0DN25 315 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 LBPP18428 481 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 HNF4AP41235 474 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 UBE2IP63279 158 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 BNC1Q01954 994 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 ELOCQ15369 112 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 KIF19Q2TAC6 998 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 C6orf136Q5SQH8 315 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 RNF165Q6ZSG1 346 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 TRIM48Q8IWZ4 208 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 FAM20CQ8IXL6 584 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 FBXL6Q8N531 539 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 ZNF548Q8NEK5 533 aaPredicted RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 NELL1Q92832 810 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 MAGEB10Q96LZ2 347 aaPredicted RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 ACPTQ9BZG2 426 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 RIC8BQ9NVN3 520 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 UCKL1Q9NWZ5 548 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 GEMIN8Q9NWZ8 242 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 SLC12A4Q9UP95 1085 aa14.89□□□□□ -0.03
GYPC-205ENST00000464053 SNRNP200O75643 2136 aaKnown RBP14.89□□□□□ -0.03
GYPC-205ENST00000464053 KIR2DS5A0A0G2JLQ3 304 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 A0A0G2JNG1 304 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 H0YIV9 168 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 KIR2DS3K7RE56 304 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 BTN3A3O00478 584 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 LSM1O15116 133 aaKnown RBP14.88□□□□□ -0.03
GYPC-205ENST00000464053 PRICKLE3O43900 615 aaPredicted RBP14.88□□□□□ -0.03
GYPC-205ENST00000464053 VPS4BO75351 444 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 VIPP01282 170 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 KLF10Q13118 480 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 SLBPQ14493 270 aaKnown RBP eCLIP14.88□□□□□ -0.03
GYPC-205ENST00000464053 KIR2DS5Q14953 304 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 KRT72Q14CN4 511 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 NR6A1Q15406 480 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 C11orf74Q86VG3 221 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 AMIGO1Q86WK6 493 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 C17orf64Q86WR6 236 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 ZNF740Q8NDX6 193 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 OR2A1Q8NGT9 310 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 EHD1Q9H4M9 534 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 PFDN4Q9NQP4 134 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 SPASTQ9UBP0 616 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 PILRBQ9UKJ0 227 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 SNX11Q9Y5W9 270 aa14.88□□□□□ -0.03
GYPC-205ENST00000464053 HEATR5BQ9P2D3 2071 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 A0A1B0GTW7 788 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 OR5K4A6NMS3 321 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 AQP9O43315 295 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 SHMT2P34897 504 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 DIO3P55073 304 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 HNRNPKP61978 463 aaKnown RBP eCLIP14.87□□□□□ -0.032e-11■■■■□ 21
GYPC-205ENST00000464053 ICE2Q659A1 982 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 OGFOD2Q6N063 350 aa14.87□□□□□ -0.03
GYPC-205ENST00000464053 GKN2Q86XP6 184 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms