RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 KRTAP13-4Q3LI77 160 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 SLC35D3Q5M8T2 416 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 FBXO47Q5MNV8 452 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 ZSCAN25Q6NSZ9 544 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 KSR2Q6VAB6 950 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 TOGARAM2Q6ZUX3 1019 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 HIST3H2AQ7L7L0 130 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 LRRC49Q8IUZ0 686 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 NPEPL1Q8NDH3 523 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 OR11H4Q8NGC9 324 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 CHURC1Q8WUH1 139 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 SLC22A18Q96BI1 424 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 DHX58Q96C10 678 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 C4orf45Q96LM5 186 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 FAM81BQ96LP2 452 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 MAGEB18Q96M61 343 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 NUDCD1Q96RS6 583 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 RAD9AQ99638 391 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 PAGR1Q9BTK6 254 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 SLC25A39Q9BZJ4 359 aaPredicted RBP0.33□□□□□ -2.36
TMEM56-204ENST00000463375 SCPEP1Q9HB40 452 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 MYNNQ9NPC7 610 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 NLGN3Q9NZ94 848 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 PKD2L2Q9NZM6 624 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 BAIAP2L1Q9UHR4 511 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 DAPK2Q9UIK4 370 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 TRIM17Q9Y577 477 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.33□□□□□ -2.36
TMEM56-204ENST00000463375 PIAS3Q9Y6X2 628 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
TMEM56-204ENST00000463375 IGKV2D-24A0A075B6R9 120 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PDXKO00764 312 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 TSPAN4O14817 238 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 OGG1O15527 345 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 TSC22D2O75157 780 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CA11O75493 328 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 ERAL1O75616 437 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 BAIAP3O94812 1187 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 ACSL3O95573 720 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 ACTL6AO96019 429 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 GH2P01242 217 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 QDPRP09417 244 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 VDRP11473 427 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 GP1BBP13224 206 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 GGT5P36269 586 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CTCFP49711 727 aaPredicted RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 RIDAP52758 137 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PTP4A2Q12974 167 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CSTF3Q12996 717 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PSG7Q13046 419 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 SRSF9Q13242 221 aaKnown RBP eCLIP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 EIF4EBP1Q13541 118 aaPredicted RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CYLC2Q14093 348 aaPredicted RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 KIAA0040Q15053 153 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PTPN14Q15678 1187 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 ODF4Q2M2E3 257 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PHLDA2Q53GA4 152 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CDC73Q6P1J9 531 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 EMBQ6PCB8 327 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 C5orf24Q7Z6I8 188 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 FAM114A1Q8IWE2 563 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CDK20Q8IZL9 346 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 TDRD7Q8NHU6 1098 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 TBC1D16Q8TBP0 767 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 SETD7Q8WTS6 366 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 CCDC107Q8WV48 283 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 SAAL1Q96ER3 474 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 C8orf48Q96LL4 319 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 IMMP1LQ96LU5 166 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 TAAR6Q96RI8 345 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 MAP7D2Q96T17 732 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 DDOQ99489 341 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 PYM1Q9BRP8 204 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF670Q9BS34 389 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 RSPO3Q9BXY4 272 aaPredicted RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 RHCGQ9UBD6 479 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 MOKQ9UQ07 419 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 R3HDM2Q9Y2K5 976 aaKnown RBP0.32□□□□□ -2.36
TMEM56-204ENST00000463375 SELENOKQ9Y6D0 94 aa0.32□□□□□ -2.36
TMEM56-204ENST00000463375 SNURFLB1AK76 121 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 TRIM49D1C9J1S8 452 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 B4GALT2O60909 372 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF324O75467 553 aaPredicted RBP0.31□□□□□ -2.36
TMEM56-204ENST00000463375 SEMA4FO95754 770 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 HSPA8P11142 646 aaKnown RBP0.31□□□□□ -2.36
TMEM56-204ENST00000463375 ACTN1P12814 892 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 NMBRP28336 390 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 SERPINB3P29508 390 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 CSTF2P33240 577 aaKnown RBP eCLIP0.31□□□□□ -2.36
TMEM56-204ENST00000463375 STX17P56962 302 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 UBE3AQ05086 875 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 TMEM44Q2T9K0 475 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 PCGF3Q3KNV8 242 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 KRTAP6-3Q3LI67 103 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 DPCR1Q3MIW9 517 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 SLC22A6Q4U2R8 563 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 ELFN2Q5R3F8 820 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 RARS2Q5T160 578 aaKnown RBP0.31□□□□□ -2.36
TMEM56-204ENST00000463375 ANO1Q5XXA6 986 aa0.31□□□□□ -2.36
TMEM56-204ENST00000463375 RPAINQ86UA6 219 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms