RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
R3HDM1-213ENST00000463230 MRPS30Q9NP92 439 aaKnown RBP12.55□□□□□ -0.4
R3HDM1-213ENST00000463230 CCDC177Q9NQR7 707 aaPredicted RBP12.55□□□□□ -0.4
R3HDM1-213ENST00000463230 STOX2Q9P2F5 926 aaPredicted RBP12.55□□□□□ -0.4
R3HDM1-213ENST00000463230 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
R3HDM1-213ENST00000463230 ZZEF1O43149 2961 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 MEN1O00255 615 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 AGXTP21549 392 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 EMP3P54852 163 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 TAS2R39P59534 338 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 GPS2Q13227 327 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 CAPN12Q6ZSI9 719 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 TTC9Q92623 222 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 FMO2Q99518 471 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 PLCD4Q9BRC7 762 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 DHRS4Q9BTZ2 278 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 PCMTD2Q9NV79 361 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 DSPP15924 2871 aaKnown RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 FITM1A5D6W6 292 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 CXorf49A8MYA2 514 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 ZNF749O43361 778 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 NTRK1P04629 796 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 EZRP15311 586 aaKnown RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 WT1P19544 449 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 GCGRP47871 477 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 RPS15P62841 145 aaKnown RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 GRM7Q14831 915 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 ZNF425Q6IV72 752 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 ADAMTSL2Q86TH1 951 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 FBF1Q8TES7 1133 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 STARD8Q92502 1023 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 MR1Q95460 341 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 ADAMTS6Q9UKP5 1117 aa12.54□□□□□ -0.4
R3HDM1-213ENST00000463230 CCDC189A1A4V9 331 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ONECUT2O95948 504 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 TCN2P20062 427 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PSMB5P28074 263 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PTPN4P29074 926 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 CDC20Q12834 499 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 KBTBD12Q3ZCT8 623 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 CDKL4Q5MAI5 379 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 AGTRAPQ6RW13 159 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 SYVN1Q86TM6 617 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PAQR7Q86WK9 346 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 CTAGE3PQ8IX95 158 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 DPH7Q9BTV6 452 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 SGPP1Q9BX95 441 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 DERL2Q9GZP9 239 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 SLC6A20Q9NP91 592 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 TMEM184CQ9NVA4 438 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 C9J4A7 227 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 TXNDC9O14530 226 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PIM1P11309 404 aaPredicted RBP12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 STMN1P16949 149 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 SLC26A3P40879 764 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ATP6V0D1P61421 351 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 FOXK1P85037 733 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 DEFB110Q30KQ9 67 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 FAM214AQ32MH5 1076 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 SUSD1Q6UWL2 747 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PPM1NQ8N819 430 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 CYTH2Q99418 400 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 NLNQ9BYT8 704 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 GPAMQ9HCL2 828 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 TXLNGQ9NUQ3 528 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ARL15Q9NXU5 204 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 IL17BQ9UHF5 180 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 PADI2Q9Y2J8 665 aa12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 MTO1Q9Y2Z2 717 aaKnown RBP12.53□□□□□ -0.4
R3HDM1-213ENST00000463230 ITPR1Q14643 2758 aa12.52□□□□□ -0.4
R3HDM1-213ENST00000463230 KRT87PA6NCN2 255 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CREG1O75629 220 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 SFTPCP11686 197 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 TBPL1P62380 186 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 USP10Q14694 798 aaKnown RBP12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 SLMAPQ14BN4 828 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 PHKG1Q16816 387 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 CAPN13Q6MZZ7 669 aaPredicted RBP12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 SBSNQ6UWP8 590 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 TMEM207Q6UWW9 146 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 FAM20CQ8IXL6 584 aa12.52□□□□□ -0.41
R3HDM1-213ENST00000463230 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms