RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RAB33BQ9H082 229 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 TMEM9BQ9NQ34 198 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 HRASLS2Q9NWW9 162 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 EPHA6Q9UF33 1036 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 ZDHHC2Q9UIJ5 367 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 RAP2CQ9Y3L5 183 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PCDHB11Q9Y5F2 797 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 KLK4Q9Y5K2 254 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 KCNE2Q9Y6J6 123 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 COL5A1P20908 1838 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-202ENST00000463060 ASCC3Q8N3C0 2202 aaKnown RBP13.84□□□□□ -0.19
COL6A1-202ENST00000463060 KCNE1BA0A087WTH5 132 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-202ENST00000463060 E7EQ34 232 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 TNFSF14O43557 240 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 KATNA1O75449 491 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 UBXN7O94888 489 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 ESRRBO95718 433 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 PROS1P07225 676 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 EBLN1P0CF75 366 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 GNAZP19086 355 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 POLR2CP19387 275 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-202ENST00000463060 CD22P20273 847 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 CD1CP29017 333 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 OR1D5P58170 312 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 GNGT1P63211 74 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 ABATP80404 500 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 DOC2AQ14183 400 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 UGT3A2Q3SY77 523 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 ASCL5Q7RTU5 278 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 CUZD1Q86UP6 607 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 FAM129CQ86XR2 697 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 LRRC34Q8IZ02 419 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 SNX31Q8N9S9 440 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-202ENST00000463060 CCDC74AQ96AQ1 378 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 EPB41L1Q9H4G0 881 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 EHD1Q9H4M9 534 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 ACTR10Q9NZ32 417 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 TAC3Q9UHF0 121 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 STK38LQ9Y2H1 464 aa13.83□□□□□ -0.2
COL6A1-202ENST00000463060 EP300Q09472 2414 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-202ENST00000463060 GDF9O60383 454 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 UGDHO60701 494 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 OR4F21O95013 312 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 FKBP9O95302 570 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 HSPA4LO95757 839 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 OTCP00480 354 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 C1GALT1C1LP0DN25 315 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 UGT2B7P16662 529 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 TYRP1P17643 537 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 MPSTP25325 297 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 CAPZBP47756 277 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 LSSP48449 732 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SEC24CP53992 1094 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SLC5A12Q1EHB4 618 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 GGTA1PQ4G0N0 100 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 LIPJQ5W064 366 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ATG9BQ674R7 924 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 NXPE4Q6UWF7 544 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SPRED1Q7Z699 444 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 OOSP2Q86WS3 158 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ZNF781Q8N8C0 355 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 OR4F6Q8NGB9 312 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SLC5A11Q8WWX8 675 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 GRAMD1AQ96CP6 724 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ACAT2Q9BWD1 397 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SHCBP1LQ9BZQ2 653 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ILKAPQ9H0C8 392 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ABCG4Q9H172 646 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 PELI2Q9HAT8 420 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SLC6A20Q9NP91 592 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 MID1IP1Q9NPA3 183 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 KCNK4Q9NYG8 393 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 POMT2Q9UKY4 750 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 ANGPTL3Q9Y5C1 460 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 RP1P56715 2156 aa13.82□□□□□ -0.2
COL6A1-202ENST00000463060 SNRNP200O75643 2136 aaKnown RBP13.81□□□□□ -0.2
COL6A1-202ENST00000463060 GMNCA6NCL1 334 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 C4orf47A7E2U8 309 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 C2orf74A8MZ97 194 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 ISM1B1AKI9 464 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 MATN2O00339 956 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 ZNF195O14628 629 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 CLGNO14967 610 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 CASC3O15234 703 aaKnown RBP13.81□□□□□ -0.2
COL6A1-202ENST00000463060 SH3BP5O60239 455 aa13.81□□□□□ -0.2
COL6A1-202ENST00000463060 TGDSO95455 350 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms