RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 GPR135Q8IZ08 494 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 DSELQ8IZU8 1212 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 CT55Q8WUE5 264 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 TSPAN17Q96FV3 270 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 ZNF285Q96NJ3 590 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 RHOXF2Q9BQY4 288 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 DPH7Q9BTV6 452 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 EFHD1Q9BUP0 239 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 MRPS30Q9NP92 439 aaKnown RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 ENAMQ9NRM1 1142 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 PCMTD2Q9NV79 361 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 RALYQ9UKM9 306 aaKnown RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 NFU1Q9UMS0 254 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 NOVA2Q9UNW9 492 aaKnown RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 MGAQ8IWI9 3026 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 FAM208BQ5VWN6 2430 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 MEN1O00255 615 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ZSCAN9O15535 394 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PHGDHO43175 533 aaKnown RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 HIST1H2AGP0C0S8 130 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 TCN2P20062 427 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 HIST1H2ADP20671 130 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PHBP35232 272 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 DLSTP36957 453 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 GCGRP47871 477 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 SLC12A2P55011 1212 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 AP1S2P56377 157 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 TBPL1P62380 186 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ABATP80404 500 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ZNF385CQ66K41 422 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ZNF425Q6IV72 752 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 LCN10Q6JVE6 187 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 FBXO42Q6P3S6 717 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 TLDC1Q6P9B6 456 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 RNF44Q7L0R7 432 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PAQR7Q86WK9 346 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ZSCAN1Q8NBB4 408 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 CLIP3Q96DZ5 547 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 HIST1H2AHQ96KK5 128 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 CYTH2Q99418 400 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 HIST1H2AJQ99878 128 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PLCD4Q9BRC7 762 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 H2AFJQ9BTM1 129 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ATG10Q9H0Y0 220 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ACSS3Q9H6R3 686 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 CCDC177Q9NQR7 707 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ARL15Q9NXU5 204 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 ANKMY1Q9P2S6 941 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PCDHGA6Q9Y5G7 932 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 MRPS18BQ9Y676 258 aaKnown RBP15.2■□□□□ 0.02
ERCC3-206ENST00000462306 AP1M2Q9Y6Q5 423 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 PCM1Q15154 2024 aa15.2■□□□□ 0.02
ERCC3-206ENST00000462306 HMX2A2RU54 273 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 NPEPPSL1A6NEC2 478 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 CCNDBP1O95273 360 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 ACSL3O95573 720 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 KLK3P07288 261 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-206ENST00000462306 HBQ1P09105 142 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 STMN1P16949 149 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 RAB10P61026 200 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 CYP4F2P78329 520 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 NAE1Q13564 534 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 DNASE1L3Q13609 305 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 FRMPD2BQ6IN97 320 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 RHBDD2Q6NTF9 364 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 SPATA6LQ8N4H0 392 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 ZNF655Q8N720 491 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-206ENST00000462306 MR1Q95460 341 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 FBXL8Q96CD0 374 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 UBXN10Q96LJ8 280 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 RUFY1Q96T51 708 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 SGPP1Q9BX95 441 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 TRIM54Q9BYV2 358 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 DERL2Q9GZP9 239 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 CHST8Q9H2A9 424 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 SYNPO2LQ9H987 977 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 ABCF3Q9NUQ8 709 aa15.19■□□□□ 0.02
ERCC3-206ENST00000462306 CUEDC1Q9NWM3 386 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-206ENST00000462306 UTP6Q9NYH9 597 aaKnown RBP15.19■□□□□ 0.02
ERCC3-206ENST00000462306 IGSF10Q6WRI0 2623 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 LOC400499M0QZD8 3231 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 LOC105369274A0A096LPK9 316 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 LOC102723532A0A0G2JNH3 316 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 A0A0J9YVX5 310 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 FITM1A5D6W6 292 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 ZNF891A8MT65 544 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-206ENST00000462306 C21orf140B9A014 251 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 NKX2-8O15522 239 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-206ENST00000462306 SRPX2O60687 465 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-206ENST00000462306 GUCA1CO95843 209 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 CAPN1P07384 714 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 CCDC166P0CW27 439 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 CSRP3P50461 194 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 RELAQ04206 551 aa15.18■□□□□ 0.02
ERCC3-206ENST00000462306 COL9A2Q14055 689 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-206ENST00000462306 TSNQ15631 228 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms