RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZDHHC3Q9NYG2 299 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 VPS4AQ9UN37 437 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ORC6Q9Y5N6 252 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TTC34A8MYJ7 566 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 LEFTY1O75610 366 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 HLA-EP13747 358 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 MAGP20916 626 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SUOXP51687 545 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SELPLGQ14242 412 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 LAPTM4AQ15012 233 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SIGIRRQ6IA17 410 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 PLEKHG7Q6ZR37 379 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM150AQ86TG1 271 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 ZSWIM9Q86XI8 627 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 MINDY1Q8N5J2 469 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 GOLM1Q8NBJ4 401 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 SH3KBP1Q96B97 665 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TADA1Q96BN2 335 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 HTATIP2Q9BUP3 242 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 RMND5AQ9H871 391 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 DYRK4Q9NR20 520 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 RIMKLBQ9ULI2 386 aa15□□□□□ -0.01
LMNB1-203ENST00000460265 TSC2P49815 1807 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 TRPM7Q96QT4 1865 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 CENPBD1B2RD01 187 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 CAPNS1P04632 268 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ANXA6P08133 673 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ELFN1P0C7U0 828 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 PRKACGP22612 351 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 MTHFRP42898 656 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ACSM2AQ08AH3 577 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ACSM2BQ68CK6 577 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 GDPD4Q6W3E5 623 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 TPD52L3Q96J77 140 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 PANX1Q96RD7 426 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 TRIM39Q9HCM9 518 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ELOVL2Q9NXB9 296 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 IFT80Q9P2H3 777 aaPredicted RBP14.99□□□□□ -0.01
LMNB1-203ENST00000460265 DOCK4Q8N1I0 1966 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 M0R3G1 203 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 SLC28A1O00337 649 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 RFXANKO14593 260 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ZNF197O14709 1029 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 GBAP04062 536 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 PGRP06401 933 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 CCR7P32248 378 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 WASP42768 502 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 WDR5P61964 334 aaKnown RBP14.99□□□□□ -0.01
LMNB1-203ENST00000460265 SLC13A2Q13183 592 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 GPR33Q49SQ1 333 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 HMBOX1Q6NT76 420 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 SLC44A2Q8IWA5 706 aaPredicted RBP14.99□□□□□ -0.01
LMNB1-203ENST00000460265 C12orf76Q8N812 135 aaPredicted RBP14.99□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM125Q96AQ2 219 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 SLCO4A1Q96BD0 722 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 AP2M1Q96CW1 435 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 HHIPL1Q96JK4 782 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 HOXD1Q9GZZ0 328 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 ABCB10Q9NRK6 738 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 CCM2LQ9NUG4 571 aaPredicted RBP14.99□□□□□ -0.01
LMNB1-203ENST00000460265 C1orf109Q9NX04 203 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 SNX6Q9UNH7 406 aa14.99□□□□□ -0.01
LMNB1-203ENST00000460265 AQP12BA6NM10 295 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 IFRD1O00458 451 aaPredicted RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 OR7A17O14581 309 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 B4GAT1O43505 415 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 FCGR1AP12314 374 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 CDH1P12830 882 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 COX7A2P14406 83 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ATP4BP51164 291 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 EMX2Q04743 252 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 MAD2L1Q13257 205 aaPredicted RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ZCCHC8Q6NZY4 707 aaKnown RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 GALNT10Q86SR1 603 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 AQP12AQ8IXF9 295 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SPERTQ8NA61 448 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ANKK1Q8NFD2 765 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 PSMA8Q8TAA3 256 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 EGLN2Q96KS0 407 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 VAPAQ9P0L0 249 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SAP18O00422 153 aaKnown RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 NUAK1O60285 661 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SYN1P17600 705 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 TNK2Q07912 1038 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 FAM20CQ8IXL6 584 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 FIBINQ8TAL6 211 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ZFP90Q8TF47 636 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 OSCP1Q8WVF1 389 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SCRN2Q96FV2 425 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 IL21Q9HBE4 155 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 CD300AQ9UGN4 299 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 PRKAB1Q9Y478 270 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 PCDHGA11Q9Y5H2 935 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 MGAT4DA6NG13 374 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 PLK4O00444 970 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ICMTO60725 284 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 DIRAS1O95057 198 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SNAP29O95721 258 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms