RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 BNIP3Q12983 259 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 SP140Q13342 867 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF366Q8N895 744 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 IGSF21Q96ID5 467 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TMLHEQ9NVH6 421 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 FAM240BA0A1B0GVZ2 78 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 LRRC14BA6NHZ5 514 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 SLC31A1O15431 190 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 C9P02748 559 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 SDC2P34741 201 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 ILF3Q12906 894 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 TIGD6Q17RP2 521 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 RTL4Q6ZR62 310 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF598Q86UK7 904 aaKnown RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 NATD1Q8N6N6 113 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MIR1-1HGQ9H1L0 117 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 AIG1Q9NVV5 245 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 RASGRP1O95267 797 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 RAB15P59190 212 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 GRIK2Q13002 908 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 IRF5Q13568 498 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 SLC9A5Q14940 896 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 IKBIPQ70UQ0 350 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 SAMD14Q8IZD0 417 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MARVELD2Q8N4S9 558 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 LRRC17Q8N6Y2 441 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 GEMIN6Q8WXD5 167 aaKnown RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 ABCB9Q9NP78 766 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 FBXL21Q9UKT6 434 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MAN2B2Q9Y2E5 1009 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 CLIC3O95833 236 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 KLK1P06870 262 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■■■■ 40.2
PTPRU-205ENST00000460170 BDKRB1P46663 353 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MVKQ03426 396 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 SYT16Q17RD7 645 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 FAM129CQ86XR2 697 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 KDM1BQ8NB78 822 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 OR5AK3PQ8NH89 298 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MOSPD2Q8NHP6 518 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 COL21A1Q96P44 957 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 RAB11FIP5Q9BXF6 653 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 COQ6Q9Y2Z9 468 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 A0A0G2JN53 185 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 PRORSD1PA6NEY8 169 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 M0QX08 132 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 PLOD3O60568 738 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 POP7O75817 140 aaKnown RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 CCNKO75909 580 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 PTGR1Q14914 329 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 PSAPL1Q6NUJ1 521 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MINDY1Q8N5J2 469 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 ZMIZ2Q8NF64 920 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 ART5Q96L15 291 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 TOR3AQ9H497 397 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MTMR10Q9NXD2 777 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 THUMPD1Q9NXG2 353 aaKnown RBP14.38□□□□□ -0.11
PTPRU-205ENST00000460170 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 PTGDR2Q9Y5Y4 395 aa14.38□□□□□ -0.11
PTPRU-205ENST00000460170 MYADML2A6NDP7 307 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 AGRPO00253 132 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 PRKACGP22612 351 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 PSMD4P55036 377 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 CDK6Q00534 326 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.37□□□□□ -0.117e-7■■■■■ 45.2
PTPRU-205ENST00000460170 DPY19L2P1Q6NXN4 242 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 HACD2Q6Y1H2 254 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TTLQ8NG68 377 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 KCNC2Q96PR1 638 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MCCC1Q96RQ3 725 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 CNPPD1Q9BV87 410 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TJP1Q07157 1748 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF840PA6NDX5 716 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 H0YC42 278 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TYRP14679 529 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 IL18R1Q13478 541 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 USP43Q70EL4 1123 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 KRT74Q7RTS7 529 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 ISCA2Q86U28 154 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 OR8J3Q8NGG0 315 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 FBXO27Q8NI29 283 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 RACGAP1Q9H0H5 632 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MRPS30Q9NP92 439 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 IL1RAPQ9NPH3 570 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 POFUT2Q9Y2G5 429 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 RPL36Q9Y3U8 105 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MAT2AP31153 395 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 CLK3P49761 638 aaKnown RBP14.37□□□□□ -0.11
PTPRU-205ENST00000460170 MXD1Q05195 221 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 TLR1Q15399 786 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 Q6ZVL8 140 aa14.37□□□□□ -0.11
PTPRU-205ENST00000460170 RAB43Q86YS6 212 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms