RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 TAS2R42Q7RTR8 314 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 BNIPLQ7Z465 357 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 DSG4Q86SJ6 1040 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 CEP57Q86XR8 500 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SFRP1Q8N474 314 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SLC5A8Q8N695 610 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 KCNH5Q8NCM2 988 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 LNX1Q8TBB1 728 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 DHX58Q96C10 678 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 DTNBP1Q96EV8 351 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 FAM84BQ96KN1 310 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 DGAT2Q96PD7 388 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TUBA1CQ9BQE3 449 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 MRPL1Q9BYD6 325 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 NFKBIZQ9BYH8 718 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 CARD9Q9H257 536 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 PPIL3Q9H2H8 161 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 LRMDAQ9H2I8 198 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 RPRD1BQ9NQG5 326 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 KLHL1Q9NR64 748 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SERINC1Q9NRX5 453 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 IARS2Q9NSE4 1012 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 CENPMQ9NSP4 180 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 TRPC4Q9UBN4 977 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 BAIAP2L1Q9UHR4 511 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 LEF1Q9UJU2 399 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 OSGIN1Q9UJX0 560 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ANAPC2Q9UJX6 822 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SNX6Q9UNH7 406 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 PCDHAC2Q9Y5I4 1007 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 BRD4O60885 1362 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 ZCCHC6Q5VYS8 1495 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 ZCWPW2A0A1B0GU75 182 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 TCRBV21S2A2A0A5A6 115 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SMIM30A4D0T7 59 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 OR5K3A6NET4 321 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NCF1BA6NI72 391 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 SLC9B1P1A6NJY1 282 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NCF1CA8MVU1 366 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 E9PBE3 544 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 PLK4O00444 970 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ANGPT2O15123 496 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 EIF3DO15371 548 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS8-215ENST00000460158 ZNHIT1O43257 154 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NUDT21O43809 227 aaKnown RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 WDR1O75083 606 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ERLIN1O75477 346 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 FLOT1O75955 427 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 LETM1O95202 739 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 FGFR1OPO95684 399 aaKnown RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 POLR2MP0CAP2 368 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 FAM106CPP0CH98 169 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 UROSP10746 265 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NCF1P14598 390 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 TRIM21P19474 475 aaKnown RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 RPA1P27694 616 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 CTNNB1P35222 781 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 CTSCP53634 463 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SNU13P55769 128 aaKnown RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 KIAA1024LP59773 190 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ERVFC1-1P60608 527 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 PRKCZQ05513 592 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 CXCL9Q07325 125 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ILF3Q12906 894 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS8-215ENST00000460158 PLD1Q13393 1074 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 BAATQ14032 418 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 SQLEQ14534 574 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 EFTUD2Q15029 972 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS8-215ENST00000460158 RPS6KA1Q15418 735 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ZRSR1Q15695 479 aaKnown RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 HYAL4Q2M3T9 481 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 RAB6CQ53S08 254 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ATAD3BQ5T9A4 648 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 IRAK1BP1Q5VVH5 260 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 METTL11BQ5VVY1 283 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 AFTPHQ6ULP2 937 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 ZNF704Q6ZNC4 412 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 CCDC80Q76M96 950 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 KCTD9Q7L273 389 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SPATA19Q7Z5L4 167 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NAGSQ8N159 534 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 KDM8Q8N371 416 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 BBS5Q8N3I7 341 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 NIPA2Q8N8Q9 360 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 CAMKVQ8NCB2 501 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 MCUQ8NE86 351 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 LPCAT1Q8NF37 534 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 OR52I2Q8NH67 350 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SECTM1Q8WVN6 248 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 CORO2AQ92828 525 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 HDAC11Q96DB2 347 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 TMCO6Q96DC7 493 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SPACA9Q96E40 222 aaPredicted RBP3.2□□□□□ -1.9
VPS8-215ENST00000460158 ERO1AQ96HE7 468 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 GAL3ST1Q99999 423 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
VPS8-215ENST00000460158 KIFC3Q9BVG8 833 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms