RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCNDBP1O95273 360 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 FKBP9O95302 570 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CAPNS1P04632 268 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 TUBBP07437 444 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CTSBP07858 339 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 ANXA5P08758 320 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.44
COL18A1-206ENST00000459895 SLC5A2P31639 672 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 SLC6A12P48065 614 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 KCNC1P48547 511 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 COL9A2Q14055 689 aaPredicted RBP12.33□□□□□ -0.44
COL18A1-206ENST00000459895 FAM83EQ2M2I3 478 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 PTCHD3Q3KNS1 767 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 TIFABQ6ZNK6 161 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 RNF44Q7L0R7 432 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 ISCA2Q86U28 154 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 ATL1Q8WXF7 558 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 RHBDF1Q96CC6 855 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 TSNARE1Q96NA8 513 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 FCRL4Q96PJ5 515 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 OR4K3Q96R72 315 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 DPH7Q9BTV6 452 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CCDC86Q9H6F5 360 aaKnown RBP12.33□□□□□ -0.44
COL18A1-206ENST00000459895 MRPS30Q9NP92 439 aaKnown RBP12.33□□□□□ -0.44
COL18A1-206ENST00000459895 THSD1Q9NS62 852 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 FGF21Q9NSA1 209 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 CD274Q9NZQ7 290 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 DKK4Q9UBT3 224 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 PCDHGA7Q9Y5G6 932 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 KLK4Q9Y5K2 254 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 FER1L5A0AVI2 2057 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 HEATR5BQ9P2D3 2071 aa12.33□□□□□ -0.44
COL18A1-206ENST00000459895 A0A1W2PPM1 405 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 OR2A25A4D2G3 310 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 HAT1O14929 419 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TAPBPO15533 448 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CTSVO60911 334 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 S100BP04271 92 aaPredicted RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 MSL3P1P0C860 447 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 FGF5P12034 268 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CDH1P12830 882 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 MTHFD2P13995 350 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ZNF28P17035 718 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CCND1P24385 295 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ACY1Q03154 408 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ZNF844Q08AG5 666 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 RASA2Q15283 850 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TMTC4Q5T4D3 741 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 DCAF12Q5T6F0 453 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ZNF425Q6IV72 752 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CAPN13Q6MZZ7 669 aaPredicted RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 KLC3Q6P597 504 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 FIGLAQ6QHK4 219 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 LCTLQ6UWM7 567 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CEACAM20Q6UY09 585 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 PAQR7Q86WK9 346 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 KLHDC8AQ8IYD2 350 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 LSMEM2Q8N112 164 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 RIBC1Q8N443 379 aaPredicted RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 OR1L3Q8NH93 324 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 RHEBL1Q8TAI7 183 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 UBTD2Q8WUN7 234 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TCTN2Q96GX1 697 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TAAR9Q96RI9 348 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 CHRNA10Q9GZZ6 450 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 FANCEQ9HB96 536 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 FBXO8Q9NRD0 319 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 INTS7Q9NVH2 962 aaKnown RBP12.32□□□□□ -0.44
COL18A1-206ENST00000459895 ANKMY1Q9P2S6 941 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 RARRES3Q9UL19 164 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
COL18A1-206ENST00000459895 TEX51A0A1B0GUA7 166 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 E7EQ34 232 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 H3BMH7 237 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 POLR1CO15160 346 aaPredicted RBP12.31□□□□□ -0.44
COL18A1-206ENST00000459895 CTIFO43310 598 aaKnown RBP12.31□□□□□ -0.44
COL18A1-206ENST00000459895 WDR47O94967 919 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 DLGAP3O95886 979 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 PYGBP11216 843 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 KRT15P19012 456 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 GDF5P43026 501 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 HSPA7P48741 367 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 AGTR2P50052 363 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 HNMTP50135 292 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
COL18A1-206ENST00000459895 ERVPABLB-1P60509 514 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 PRDX1Q06830 199 aaKnown RBP12.31□□□□□ -0.44
COL18A1-206ENST00000459895 ACAP2Q15057 778 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 FRMPD2BQ6IN97 320 aa12.31□□□□□ -0.44
COL18A1-206ENST00000459895 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms