RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CGREF1Q99674 301 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ZPBPQ9BS86 351 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ATG10Q9H0Y0 220 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 TNFRSF12AQ9NP84 129 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ANGPTL2Q9UKU9 493 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 GFYI3L273 518 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 QSOX1O00391 747 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 TAPBPO15533 448 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 JUNDP17535 347 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 CNR2P34972 360 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 RPIAP49247 311 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 SHC2P98077 582 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 PDK4Q16654 411 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 KIF19Q2TAC6 998 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 FRA10AC1Q70Z53 315 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 SLC9B2Q86UD5 537 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 FAM26EQ8N5C1 309 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 PRR11Q96HE9 360 aaPredicted RBP10.02□□□□□ -0.81
USP39-210ENST00000459775 IL17FQ96PD4 163 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 IMP3Q9NV31 184 aaKnown RBP10.02□□□□□ -0.81
USP39-210ENST00000459775 UCKL1Q9NWZ5 548 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 SH3BGRL2Q9UJC5 107 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 ASF1AQ9Y294 204 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 SNX11Q9Y5W9 270 aa10.02□□□□□ -0.81
USP39-210ENST00000459775 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 KPNA5O15131 536 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 FFAR2O15552 330 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TRIM13O60858 407 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 NPPAP01160 153 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TPBGLP0DKB5 382 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 CBSLP0DN79 551 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ENO3P13929 434 aaPredicted RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 TGM1P22735 817 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 KELP23276 732 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ATP5F1P24539 256 aaPredicted RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 CBSP35520 551 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 HSPA7P48741 367 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TUBA4AP68366 448 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ACY1Q03154 408 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PARGQ86W56 976 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PHACTR4Q8IZ21 702 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 C7orf57Q8NEG2 295 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 RHEBL1Q8TAI7 183 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TFGQ92734 400 aaPredicted RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 MAGEB18Q96M61 343 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 C12orf66Q96MD2 445 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ZNF317Q96PQ6 595 aaPredicted RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 EGFL8Q99944 293 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 LRRC61Q9BV99 259 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 SLC12A9Q9BXP2 914 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PCED1AQ9H1Q7 454 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 FGFR1OP2Q9NVK5 253 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ARL15Q9NXU5 204 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 MARCOQ9UEW3 520 aaPredicted RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 ZNF292O60281 2723 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 THADAQ6YHU6 1953 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 GPR179Q6PRD1 2367 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 GPR89AB7ZAQ6 455 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TNFRSF10CO14798 259 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PSIP1O75475 530 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 C1orf105O95561 183 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 SLC16A8O95907 504 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TNFP01375 233 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 GPR89BP0CG08 455 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 MPC1LP0DKB6 136 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 MYF5P13349 255 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 EEF1DP29692 281 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 PRKAA2P54646 552 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 NXPH1P58417 271 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 YBX1P67809 324 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 CSRP2Q16527 193 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 UNC50Q53HI1 259 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 ADAMTSL2Q86TH1 951 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PDZD3Q86UT5 571 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 FBXO39Q8N4B4 442 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 LRRC8CQ8TDW0 803 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PKP4Q99569 1192 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TMEM79Q9BSE2 394 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TIMM29Q9BSF4 260 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 HGH1Q9BTY7 390 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 XKR8Q9H6D3 395 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 PARVBQ9HBI1 364 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 HPF1Q9NWY4 346 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 APOBEC3BQ9UH17 382 aaKnown RBP10.01□□□□□ -0.81
USP39-210ENST00000459775 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 SATB2Q9UPW6 733 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 OARD1Q9Y530 152 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
USP39-210ENST00000459775 TMEM233B4DJY2 109 aa10□□□□□ -0.81
USP39-210ENST00000459775 UBFD1O14562 309 aaKnown RBP10□□□□□ -0.81
USP39-210ENST00000459775 BIRC5O15392 142 aa10□□□□□ -0.81
USP39-210ENST00000459775 SUPT7LO94864 414 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms