RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CD38P28907 300 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 RACK1P63244 317 aaKnown RBP23.6■■□□□ 1.37
U2AF1-204ENST00000459639 KCNJ2P63252 427 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 MAD2L1Q13257 205 aaPredicted RBP23.6■■□□□ 1.37
U2AF1-204ENST00000459639 AP5B1Q2VPB7 878 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 OR52E1Q8NGJ3 308 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 OR2L8Q8NGY9 312 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 WDR20Q8TBZ3 569 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 HSPA12BQ96MM6 686 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 RTKNQ9BST9 563 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 ACPTQ9BZG2 426 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 BRINP2Q9C0B6 783 aa23.6■■□□□ 1.37
U2AF1-204ENST00000459639 CCDC163A0A0D9SF12 145 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 RSL1D1O76021 490 aaKnown RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 VARSP26640 1264 aaKnown RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 CSTF3Q12996 717 aaKnown RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 AGKQ53H12 422 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 PAGE2BQ5JRK9 111 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 C10orf62Q5T681 223 aaPredicted RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 NXPE4Q6UWF7 544 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 PHACTR4Q8IZ21 702 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 RBM15BQ8NDT2 890 aaKnown RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 REPS1Q96D71 796 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 MTFMTQ96DP5 389 aaKnown RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 RAB3IPQ96QF0 476 aaPredicted RBP23.59■■□□□ 1.37
U2AF1-204ENST00000459639 TBC1D10AQ9BXI6 508 aa23.59■■□□□ 1.37
U2AF1-204ENST00000459639 MAP3K13O43283 966 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 PDGFBP01127 241 aaPredicted RBP23.58■■□□□ 1.37
U2AF1-204ENST00000459639 WNT1P04628 370 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 BCKDHBP21953 392 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 DIO3P55073 304 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 MXRA7P84157 204 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 HMGCS1Q01581 520 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 LAPTM5Q13571 262 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 RPS6KA2Q15349 733 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 TCEA2Q15560 299 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 DNAL1Q4LDG9 190 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 PDCD4Q53EL6 469 aaKnown RBP23.58■■□□□ 1.37
U2AF1-204ENST00000459639 CATSPEREQ5SY80 951 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 MED27Q6P2C8 311 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 LINC01555Q8NAE3 123 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 C1orf50Q9BV19 199 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 TCEAL2Q9H3H9 227 aaPredicted RBP23.58■■□□□ 1.37
U2AF1-204ENST00000459639 LRTM1Q9HBL6 345 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 SPATA6Q9NWH7 488 aaPredicted RBP23.58■■□□□ 1.37
U2AF1-204ENST00000459639 C1orf109Q9NX04 203 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 NOP53Q9NZM5 478 aaKnown RBP23.58■■□□□ 1.37
U2AF1-204ENST00000459639 TAC3Q9UHF0 121 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 KLF15Q9UIH9 416 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 ICKQ9UPZ9 632 aa23.58■■□□□ 1.37
U2AF1-204ENST00000459639 A0A1W2PPV9 198 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 HSD3B1P14060 373 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 CD1EP15812 388 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 HSD3B2P26439 372 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 NEK2P51955 445 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 GK5Q6ZS86 529 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 C17orf64Q86WR6 236 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 ZFAND4Q86XD8 727 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 C2orf73Q8N5S3 287 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 FBXO27Q8NI29 283 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 EDAQ92838 391 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 SH3KBP1Q96B97 665 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 TMEM45AQ9NWC5 275 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 ASIC5Q9NY37 505 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 CCDC167Q9P0B6 97 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 ZNF624Q9P2J8 865 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 TP53BP1Q12888 1972 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 H0YHG0 523 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 RPL38P63173 70 aaKnown RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 DMWDQ09019 674 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 CUL3Q13618 768 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 SLBPQ14493 270 aaKnown RBP eCLIP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 PAOXQ6QHF9 649 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 CXorf40BQ96DE9 158 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 NRTNQ99748 197 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 DUSP15Q9H1R2 295 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 PELI2Q9HAT8 420 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 BRF2Q9HAW0 419 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 TM9SF3Q9HD45 589 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 GEMIN8Q9NWZ8 242 aaKnown RBP23.57■■□□□ 1.36
U2AF1-204ENST00000459639 TAAR2Q9P1P5 351 aa23.57■■□□□ 1.36
U2AF1-204ENST00000459639 ARHGEF17Q96PE2 2063 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 PIPSLA2A3N6 862 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 KRT16P08779 473 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 CTSEP14091 401 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 SLC2A4P14672 509 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 MAOBP27338 520 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 CPOXP36551 454 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 HIST2H2ACQ16777 129 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 RFTN2Q52LD8 501 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 HIST2H2AA3Q6FI13 130 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 PARP9Q8IXQ6 854 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 LAS2Q8IYD9 372 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 OR7G3Q8NG95 312 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 OR9I1Q8NGQ6 314 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 SLC25A23Q9BV35 468 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 CADM1Q9BY67 442 aaKnown RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 PRMT8Q9NR22 394 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-204ENST00000459639 ZIM2Q9NZV7 527 aa23.56■■□□□ 1.36
U2AF1-204ENST00000459639 APOBEC3BQ9UH17 382 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms