RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CXorf49A8MYA2 514 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 GFYI3L273 518 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 EIF3FO00303 357 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 TERTO14746 1132 aaKnown RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 CCNDBP1O95273 360 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 GUCA1CO95843 209 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 HIST1H2AGP0C0S8 130 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 CTAGE8P0CG41 777 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 HIST1H2ADP20671 130 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 PTPN4P29074 926 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 IMPA1P29218 277 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 RORAP35398 523 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 HSD17B2P37059 387 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 MAGEA4P43358 317 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 TBPL1P62380 186 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 ARHGAP19Q14CB8 494 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 PHKG1Q16816 387 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 FRMPD2BQ6IN97 320 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 TLDC1Q6P9B6 456 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 FAM198BQ6UWH4 519 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 C3orf62Q6ZUJ4 267 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CTAGE6Q86UF2 777 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 SLC26A11Q86WA9 606 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CTAGE4Q8IX94 777 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 EXD3Q8N9H8 876 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 DLG3Q92796 817 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 VPS39Q96JC1 886 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 HIST1H2AHQ96KK5 128 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CATSPER2Q96P56 530 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 HIST1H2AJQ99878 128 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 H2AFJQ9BTM1 129 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CAB39LQ9H9S4 337 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 CCDC177Q9NQR7 707 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 CUEDC1Q9NWM3 386 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 MOCS1Q9NZB8 636 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 STOX2Q9P2F5 926 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 IFT80Q9P2H3 777 aaPredicted RBP17.92■□□□□ 0.46
USP39-209ENST00000458268 SRPK3Q9UPE1 567 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 MAN2B2Q9Y2E5 1009 aa17.92■□□□□ 0.46
USP39-209ENST00000458268 ATRXP46100 2492 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 MDC1Q14676 2089 aaKnown RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 TCRBV9S1A1TA0A576 114 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 NPEPPSL1A6NEC2 478 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 E7ENX8 843 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 FKBP9O95302 570 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 STATHP02808 62 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 ERGP11308 486 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 POLE2P56282 527 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 TAP2Q03519 686 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 SP140Q13342 867 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 NAE1Q13564 534 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 FRG1Q14331 258 aaKnown RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 PRAMEF13Q5VWM6 474 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 PLD3Q8IV08 490 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 PPM1NQ8N819 430 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 FBXO15Q8NCQ5 510 aaPredicted RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 ZUFSPQ96AP4 578 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 CCDC138Q96M89 665 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 LRFN5Q96NI6 719 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 TRIM54Q9BYV2 358 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 PARVBQ9HBI1 364 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 ARL15Q9NXU5 204 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 POLHQ9Y253 713 aa17.91■□□□□ 0.46
USP39-209ENST00000458268 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
USP39-209ENST00000458268 LOC105369274A0A096LPK9 316 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 LOC102723532A0A0G2JNH3 316 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 TAS2R39P59534 338 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 GPX6P59796 221 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 DCDP81605 110 aaKnown RBP17.9■□□□□ 0.46
USP39-209ENST00000458268 NFATC3Q12968 1075 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 IL10RAQ13651 578 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 EFTUD2Q15029 972 aaKnown RBP eCLIP17.9■□□□□ 0.463e-8■■□□□ 13.7
USP39-209ENST00000458268 WASHC2DQ5SRD0 308 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 RHBDD2Q6NTF9 364 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 AGTRAPQ6RW13 159 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 OR4N4Q8N0Y3 316 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 DTWD1Q8N5C7 304 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 ZFYVE21Q9BQ24 234 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 GPR87Q9BY21 358 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 CHRNA10Q9GZZ6 450 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 GPAMQ9HCL2 828 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 CUTCQ9NTM9 273 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 PCDHGA6Q9Y5G7 932 aa17.9■□□□□ 0.46
USP39-209ENST00000458268 SEC16AO15027 2179 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 TARM1B6A8C7 271 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 PHGDHO43175 533 aaKnown RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 TSPAN12O95859 305 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 OTX2P32243 289 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 FOXL2P58012 376 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 USP10Q14694 798 aaKnown RBP17.89■□□□□ 0.45
USP39-209ENST00000458268 GRM7Q14831 915 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 SLMAPQ14BN4 828 aa17.89■□□□□ 0.45
USP39-209ENST00000458268 NAA25Q14CX7 972 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms