RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 USP39Q53GS9 565 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 LACTB2Q53H82 288 aaPredicted RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 PRAMEF13Q5VWM6 474 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 FAM91A1Q658Y4 838 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PMS2CLQ68D20 193 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 NXNQ6DKJ4 435 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 IYDQ6PHW0 289 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 IL27RAQ6UWB1 636 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 RINLQ6ZS11 566 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 TMPRSS11BQ86T26 416 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PARGQ86W56 976 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PLD3Q8IV08 490 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 FUNDC1Q8IVP5 155 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 DDIASQ8IXT1 998 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 SYTL1Q8IYJ3 562 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 TBC1D21Q8IYX1 336 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 TCAIMQ8N3R3 496 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 MFSD2AQ8NA29 543 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 WDR20Q8TBZ3 569 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 METTL6Q8TCB7 284 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 ACTRT2Q8TDY3 377 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 SLC37A2Q8TED4 501 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 UTP4Q969X6 686 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 HIST1H2AHQ96KK5 128 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 RILPQ96NA2 401 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 HIST1H2AJQ99878 128 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 H2AFJQ9BTM1 129 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 CCDC28BQ9BUN5 200 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 NUSAP1Q9BXS6 441 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 TRIM54Q9BYV2 358 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 TRIT1Q9H3H1 467 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 SMOC1Q9H4F8 434 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 ACTR8Q9H981 624 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 IL21RQ9HBE5 538 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 EML4Q9HC35 981 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 GEMIN8Q9NWZ8 242 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 TRNAU1APQ9NX07 287 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 APOBEC3BQ9UH17 382 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 ANGPTL3Q9Y5C1 460 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 SNX11Q9Y5W9 270 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PI4KAP42356 2102 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 VCANP13611 3396 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 FEZF1A0PJY2 475 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ASPDHA6ND91 283 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 B4DGG1 531 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 LSM1O15116 133 aaKnown RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 SH3BP5O60239 455 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 NOBOXO60393 691 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 PEX11AO75192 247 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 CLDN9O95484 217 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 OTCP00480 354 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 TNFP01375 233 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 CSF2P04141 144 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ENO1P06733 434 aaKnown RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 CTSBP07858 339 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SERPINA6P08185 405 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 EBLN1P0CF75 366 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 F3P13726 295 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 JUPP14923 745 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 NCF2P19878 526 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 GPX3P22352 226 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 TACR1P25103 407 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 HTR1BP28222 390 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ARL1P40616 181 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 HALP42357 657 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SCTRP47872 440 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 DHPSP49366 369 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 HNMTP50135 292 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 KCNJ2P63252 427 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 PLOD1Q02809 727 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 PCDH1Q08174 1060 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 GPR18Q14330 331 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SLBPQ14493 270 aaKnown RBP eCLIP8.42□□□□□ -1.06
RIF1-208ENST00000457745 LPAL2Q16609 132 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 GGTA1PQ4G0N0 100 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 RFTN2Q52LD8 501 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 XKR6Q5GH73 641 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 C6orf136Q5SQH8 315 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 PAOXQ6QHF9 649 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 WASH2PQ6VEQ5 465 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 KANSL1Q7Z3B3 1105 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 LONP2Q86WA8 852 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 FAM129CQ86XR2 697 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 MYLK4Q86YV6 388 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 C1orf210Q8IVY1 113 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ADGRF3Q8IZF5 1079 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 CPSF7Q8N684 471 aaKnown RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 ZNF548Q8NEK5 533 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 OR2A1Q8NGT9 310 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 LMX1AQ8TE12 382 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 GAB3Q8WWW8 586 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 STON2Q8WXE9 905 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 ATP6V1E2Q96A05 226 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 RAD51AP1Q96B01 352 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 WDR34Q96EX3 536 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 APIPQ96GX9 242 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 FOPNLQ96NB1 174 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 257.1 ms